The 2.0 version of rSNPBase

Variant report

Variant rs1145231
Chromosome Location chr2:190719179-190719180
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190656800-190721000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr2:190658200-190743800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr2:190659800-190743600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr2:190664800-190741800 Weak transcription Brain Angular Gyrus brain
5 chr2:190669400-190743800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr2:190671000-190719600 Weak transcription NH-A brain
7 chr2:190681000-190743000 Weak transcription Brain Germinal Matrix brain
8 chr2:190684000-190743600 Weak transcription Brain Inferior Temporal Lobe brain
9 chr2:190685000-190736400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr2:190685400-190739400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr2:190685400-190741800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr2:190687000-190724400 Weak transcription Esophagus oesophagus
13 chr2:190687000-190738400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:190687000-190738400 Weak transcription Lung lung
15 chr2:190691000-190744200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr2:190701200-190743200 Weak transcription Fetal Brain Male brain
17 chr2:190701400-190744000 Weak transcription Fetal Brain Female brain
18 chr2:190701600-190727400 Weak transcription HSMMtube muscle
19 chr2:190701600-190743200 Weak transcription Stomach Smooth Muscle stomach
20 chr2:190701600-190744800 Weak transcription Rectal Smooth Muscle rectum
21 chr2:190701800-190745200 Weak transcription Fetal Kidney kidney
22 chr2:190702400-190745600 Weak transcription Colon Smooth Muscle Colon
23 chr2:190703600-190719600 Weak transcription NHLF lung
24 chr2:190705200-190740000 Weak transcription Right Ventricle heart
25 chr2:190705400-190721400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr2:190706800-190742800 Weak transcription Fetal Heart heart
27 chr2:190707000-190738200 Weak transcription Brain Hippocampus Middle brain
28 chr2:190707000-190741400 Weak transcription Brain Anterior Caudate brain
29 chr2:190707400-190741200 Weak transcription Brain Substantia Nigra brain
30 chr2:190707600-190746000 Weak transcription Left Ventricle heart
31 chr2:190708400-190743400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr2:190708800-190744400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr2:190709200-190719200 Weak transcription Osteobl bone
34 chr2:190709200-190727200 Weak transcription A549 lung
35 chr2:190709600-190744000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr2:190710600-190741800 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr2:190711000-190726800 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr2:190711800-190733000 Weak transcription Spleen Spleen
39 chr2:190713000-190719400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr2:190713200-190743400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr2:190713200-190743800 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr2:190713200-190745600 Weak transcription Pancreas Pancrea
43 chr2:190713600-190720600 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr2:190713800-190721200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr2:190713800-190726400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr2:190713800-190727600 Weak transcription Fetal Muscle Trunk muscle
47 chr2:190713800-190729600 Weak transcription Fetal Lung lung
48 chr2:190713800-190743800 Weak transcription Fetal Intestine Large intestine
49 chr2:190713800-190744400 Weak transcription Gastric stomach
50 chr2:190713800-190744800 Weak transcription K562 blood

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Last update: Aug 31, 2015