The 2.0 version of rSNPBase

Variant report

Variant rs16831859
Chromosome Location chr2:190547434-190547435
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190534000-190550200 Weak transcription K562 blood
2 chr2:190539800-190550200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr2:190539800-190550200 Weak transcription Esophagus oesophagus
4 chr2:190539800-190550200 Weak transcription Small Intestine intestine
5 chr2:190540000-190550200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr2:190540000-190550200 Weak transcription Fetal Thymus thymus
7 chr2:190540000-190550400 Weak transcription Fetal Kidney kidney
8 chr2:190540000-190563400 Weak transcription Aorta Aorta
9 chr2:190540200-190547800 Weak transcription HMEC breast
10 chr2:190540200-190550200 Weak transcription Right Atrium heart
11 chr2:190540200-190550200 Weak transcription Right Ventricle heart
12 chr2:190540200-190578000 Weak transcription Fetal Brain Male brain
13 chr2:190540400-190550200 Weak transcription Muscle Satellite Cultured Cells --
14 chr2:190540400-190550200 Weak transcription Fetal Stomach stomach
15 chr2:190540400-190550200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr2:190540400-190550200 Weak transcription HSMMtube muscle
17 chr2:190540400-190550200 Weak transcription NHLF lung
18 chr2:190540400-190550400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr2:190540400-190550400 Weak transcription HSMM muscle
20 chr2:190540400-190558400 Weak transcription Fetal Intestine Small intestine
21 chr2:190540400-190564200 Weak transcription Placenta Placenta
22 chr2:190540400-190572000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr2:190540400-190576400 Weak transcription Fetal Muscle Trunk muscle
24 chr2:190540600-190549800 Weak transcription Primary hematopoietic stem cells blood
25 chr2:190540600-190550200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr2:190540600-190550200 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr2:190540600-190550200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr2:190540600-190550200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr2:190540600-190550200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr2:190540600-190550200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr2:190540800-190547600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr2:190540800-190549600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr2:190540800-190549800 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr2:190540800-190550200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr2:190540800-190550200 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr2:190540800-190550400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr2:190540800-190550400 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr2:190540800-190550400 Weak transcription Brain Inferior Temporal Lobe brain
39 chr2:190540800-190561000 Weak transcription HepG2 liver
40 chr2:190540800-190562800 Weak transcription Liver Liver
41 chr2:190540800-190563800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr2:190540800-190572200 Weak transcription Stomach Smooth Muscle stomach
43 chr2:190540800-190576400 Weak transcription Pancreas Pancrea
44 chr2:190540800-190592600 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr2:190540800-190611800 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr2:190540800-190618400 Weak transcription Brain Cingulate Gyrus brain
47 chr2:190541400-190550200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr2:190541600-190617000 Weak transcription Colon Smooth Muscle Colon
49 chr2:190541800-190550200 Weak transcription A549 lung
50 chr2:190541800-190550400 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015