Variant report

Variant	rs1145868
Chromosome Location	chr6:82407700-82407701
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1144175	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1144176	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1145869	0.91[EUR][1000 genomes]
rs1145872	0.92[EUR][1000 genomes]
rs1145873	0.91[EUR][1000 genomes]
rs1145874	0.92[EUR][1000 genomes]
rs1145875	0.92[EUR][1000 genomes]
rs1276905	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82405400-82407800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr6:82406200-82407800	Enhancers	Rectal Smooth Muscle	rectum
3	chr6:82406200-82407800	Enhancers	HSMM	muscle
4	chr6:82406600-82408400	Enhancers	Hela-S3	cervix
5	chr6:82407200-82407800	Enhancers	Stomach Smooth Muscle	stomach
6	chr6:82407200-82407800	Enhancers	Osteobl	bone
7	chr6:82407400-82407800	Enhancers	NHLF	lung
8	chr6:82407400-82408200	Weak transcription	Psoas Muscle	Psoas
9	chr6:82407400-82408600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr6:82407400-82410200	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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