Variant report

Variant	rs1145869
Chromosome Location	chr6:82403709-82403710
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1144175	0.94[EUR][1000 genomes]
rs1144176	0.94[EUR][1000 genomes]
rs1145868	0.91[EUR][1000 genomes]
rs1145872	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1145873	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1145874	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1145875	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1276905	0.94[EUR][1000 genomes]
rs59139758	0.92[ASN][1000 genomes]
rs940509	0.80[AFR][1000 genomes]
rs940510	0.80[AFR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82400600-82406200	Weak transcription	Placenta	Placenta
2	chr6:82402600-82403800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr6:82402800-82405600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr6:82403000-82404200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr6:82403200-82405600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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