Variant report

Variant	rs940510
Chromosome Location	chr6:82399967-82399968
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10943830	1.00[CHB][hapmap]
rs1145869	0.80[AFR][1000 genomes]
rs1145871	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1145872	0.94[AFR][1000 genomes]
rs1145873	0.94[AFR][1000 genomes]
rs1145874	0.94[AFR][1000 genomes]
rs1145875	0.94[AFR][1000 genomes]
rs17661047	1.00[CHB][hapmap]
rs1880360	1.00[CHB][hapmap]
rs7769744	1.00[CHB][hapmap]
rs940509	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs940510	ME1	cis	parietal	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82399400-82400600	Enhancers	Left Ventricle	heart
2	chr6:82399600-82400000	Enhancers	Fetal Heart	heart
3	chr6:82399600-82400600	Enhancers	Placenta	Placenta

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links