Variant report

Variant rs11465203
Chromosome Location chr1:155162957-155162958
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155146600-155163000 Weak transcription Aorta Aorta
2 chr1:155150000-155163000 Weak transcription Fetal Brain Male brain
3 chr1:155152400-155163000 Weak transcription HUVEC blood vessel
4 chr1:155152600-155163000 Weak transcription Brain Substantia Nigra brain
5 chr1:155152800-155163000 Weak transcription NH-A brain
6 chr1:155156600-155163000 Weak transcription Brain Cingulate Gyrus brain
7 chr1:155156800-155163000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:155157000-155163000 Weak transcription Brain Angular Gyrus brain
9 chr1:155157800-155163000 Weak transcription Brain Hippocampus Middle brain
10 chr1:155159200-155163600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:155161600-155163000 Active TSS Rectal Mucosa Donor 31 rectum
12 chr1:155161600-155163200 Active TSS Colonic Mucosa Colon
13 chr1:155161600-155163600 Active TSS Pancreas Pancrea
14 chr1:155161800-155163000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:155161800-155163000 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr1:155161800-155163000 Active TSS Stomach Mucosa stomach
17 chr1:155161800-155164600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:155161800-155165600 Active TSS Pancreatic Islets Pancreatic Islet
19 chr1:155162000-155163000 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr1:155162000-155163000 Active TSS Rectal Smooth Muscle rectum
21 chr1:155162200-155163000 Enhancers Primary T cells from cord blood blood
22 chr1:155162200-155163000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:155162200-155163000 Enhancers Cortex derived primary cultured neurospheres brain
24 chr1:155162200-155163000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:155162200-155163000 Enhancers Duodenum Mucosa Duodenum
26 chr1:155162200-155163000 Enhancers Fetal Brain Female brain
27 chr1:155162200-155163000 Bivalent Enhancer Fetal Muscle Trunk muscle
28 chr1:155162200-155163000 Enhancers Right Ventricle heart
29 chr1:155162200-155163200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:155162200-155163200 Enhancers Spleen Spleen
31 chr1:155162200-155164000 Active TSS Duodenum Smooth Muscle Duodenum
32 chr1:155162200-155164400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
33 chr1:155162200-155164600 Flanking Active TSS Stomach Smooth Muscle stomach
34 chr1:155162200-155165400 Active TSS Fetal Kidney kidney
35 chr1:155162400-155163000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr1:155162400-155163000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:155162400-155163000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:155162400-155163000 Enhancers Primary B cells from peripheral blood blood
39 chr1:155162400-155163000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
40 chr1:155162400-155163000 Enhancers Adipose Nuclei Adipose
41 chr1:155162400-155163000 Enhancers Brain Anterior Caudate brain
42 chr1:155162400-155163000 Active TSS Colon Smooth Muscle Colon
43 chr1:155162400-155163000 Flanking Active TSS Esophagus oesophagus
44 chr1:155162400-155163000 Bivalent Enhancer Fetal Thymus thymus
45 chr1:155162400-155163000 Enhancers Skeletal Muscle Male skeletal muscle
46 chr1:155162400-155163000 Enhancers Skeletal Muscle Female skeletal muscle
47 chr1:155162400-155163000 Enhancers HSMMtube muscle
48 chr1:155162400-155163200 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
49 chr1:155162400-155163400 Flanking Active TSS H1 Cell Line embryonic stem cell
50 chr1:155162400-155163400 Enhancers Placenta Amnion Placenta Amnion

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