The 2.0 version of rSNPBase

Variant report

Variant rs1146674
Chromosome Location chr1:77629840-77629841
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77595400-77640400 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr1:77606200-77651600 Weak transcription Aorta Aorta
3 chr1:77612800-77630200 Weak transcription Psoas Muscle Psoas
4 chr1:77614400-77630200 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr1:77614400-77631000 Weak transcription Brain Cingulate Gyrus brain
6 chr1:77614400-77634000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr1:77614400-77634000 Weak transcription Osteobl bone
8 chr1:77614400-77635600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:77614400-77635600 Weak transcription NHDF-Ad bronchial
10 chr1:77614600-77632000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr1:77616200-77663200 Weak transcription Brain Hippocampus Middle brain
12 chr1:77617200-77636000 Weak transcription HSMM muscle
13 chr1:77618200-77633000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:77618400-77632200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:77618400-77633200 Weak transcription Fetal Brain Male brain
16 chr1:77618600-77630000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr1:77618600-77630600 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:77618600-77633000 Weak transcription Stomach Smooth Muscle stomach
19 chr1:77618600-77634600 Weak transcription Right Ventricle heart
20 chr1:77619000-77638000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:77619000-77640200 Weak transcription A549 lung
22 chr1:77620200-77633200 Weak transcription Brain Angular Gyrus brain
23 chr1:77621000-77632200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:77621000-77641600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:77621800-77634000 Weak transcription Muscle Satellite Cultured Cells --
26 chr1:77622600-77633800 Weak transcription HUVEC blood vessel
27 chr1:77623200-77630000 Weak transcription Fetal Muscle Leg muscle
28 chr1:77623200-77631400 Weak transcription Spleen Spleen
29 chr1:77623200-77639400 Weak transcription Fetal Lung lung
30 chr1:77623400-77641000 Weak transcription Rectal Smooth Muscle rectum
31 chr1:77624000-77630800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr1:77624200-77630800 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr1:77625000-77630000 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr1:77625000-77634200 Weak transcription Esophagus oesophagus
35 chr1:77625200-77631600 Strong transcription Primary T helper cells fromperipheralblood blood
36 chr1:77625400-77630400 Weak transcription Gastric stomach
37 chr1:77625600-77630200 Weak transcription GM12878-XiMat blood
38 chr1:77625600-77631800 Weak transcription Fetal Muscle Trunk muscle
39 chr1:77625600-77632400 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr1:77625600-77634600 Weak transcription Pancreas Pancrea
41 chr1:77625600-77637800 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr1:77625800-77633400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:77625800-77635200 Weak transcription Fetal Intestine Small intestine
44 chr1:77625800-77640000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr1:77626000-77630000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr1:77626000-77631800 Strong transcription Primary monocytes fromperipheralblood blood
47 chr1:77626000-77631800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:77626000-77631800 Weak transcription Duodenum Mucosa Duodenum
49 chr1:77626000-77631800 Weak transcription Lung lung
50 chr1:77626000-77634000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015