Variant report

Variant	rs11505751
Chromosome Location	chr7:136689870-136689871
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10242859	0.88[AFR][1000 genomes]
rs10261540	1.00[AMR][1000 genomes]
rs10282542	0.82[AFR][1000 genomes]
rs13437975	1.00[AMR][1000 genomes]
rs28628071	1.00[AMR][1000 genomes]
rs28716163	1.00[AMR][1000 genomes]
rs34259336	0.92[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv831147	chr7:136583444-136755741	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	esv2753059	chr7:136633745-136893745	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136674800-136694200	Weak transcription	Left Ventricle	heart
2	chr7:136686200-136690600	Weak transcription	Right Ventricle	heart
3	chr7:136686200-136691000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr7:136686200-136692200	Weak transcription	Ovary	ovary
5	chr7:136686400-136692000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr7:136686600-136690400	Weak transcription	Fetal Stomach	stomach
7	chr7:136686600-136691000	Weak transcription	Osteobl	bone
8	chr7:136687600-136694400	Enhancers	Fetal Heart	heart
9	chr7:136688400-136690600	Weak transcription	NHLF	lung
10	chr7:136688600-136690800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr7:136689200-136692200	Enhancers	Colon Smooth Muscle	Colon
12	chr7:136689400-136690600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr7:136689600-136690000	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr7:136689800-136690000	Weak transcription	Stomach Smooth Muscle	stomach
15	chr7:136689800-136690600	Weak transcription	Fetal Lung	lung
16	chr7:136689800-136691600	Enhancers	Stomach Mucosa	stomach
17	chr7:136689800-136692000	Enhancers	Rectal Smooth Muscle	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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