Variant report
| Variant | rs1150717 |
|---|---|
| Chromosome Location | chr6:28259597-28259598 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:28249800-28272200 | Weak transcription | Spleen | Spleen |
| 2 | chr6:28250000-28277600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr6:28250000-28293800 | Weak transcription | Gastric | stomach |
| 4 | chr6:28250200-28273800 | Weak transcription | Thymus | Thymus |
| 5 | chr6:28250400-28265600 | Weak transcription | Primary T cells from cord blood | blood |
| 6 | chr6:28250400-28278600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 7 | chr6:28250600-28267000 | Weak transcription | NHEK | skin |
| 8 | chr6:28250600-28270800 | Weak transcription | Fetal Heart | heart |
| 9 | chr6:28250600-28280600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 10 | chr6:28250800-28270000 | Weak transcription | Psoas Muscle | Psoas |
| 11 | chr6:28250800-28276800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 12 | chr6:28251000-28270800 | Weak transcription | Colonic Mucosa | Colon |
| 13 | chr6:28251000-28273800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 14 | chr6:28251000-28277200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 15 | chr6:28251000-28278800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 16 | chr6:28251400-28262200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 17 | chr6:28253400-28264400 | Weak transcription | NHLF | lung |
| 18 | chr6:28253400-28264600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 19 | chr6:28255200-28264400 | Weak transcription | Aorta | Aorta |
| 20 | chr6:28255200-28268600 | Weak transcription | Ovary | ovary |
| 21 | chr6:28255200-28271200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 22 | chr6:28255200-28271600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 23 | chr6:28255200-28278600 | Weak transcription | Esophagus | oesophagus |
| 24 | chr6:28255200-28278600 | Weak transcription | Pancreas | Pancrea |
| 25 | chr6:28255200-28278800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 26 | chr6:28255200-28283000 | Weak transcription | HSMMtube | muscle |
| 27 | chr6:28255200-28293800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 28 | chr6:28255400-28261200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 29 | chr6:28255400-28271200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 30 | chr6:28255400-28278400 | Weak transcription | HepG2 | liver |
| 31 | chr6:28255600-28264800 | Weak transcription | HUVEC | blood vessel |
| 32 | chr6:28255600-28271400 | Weak transcription | Placenta | Placenta |
| 33 | chr6:28255600-28272000 | Weak transcription | Brain Substantia Nigra | brain |
| 34 | chr6:28256000-28267600 | Weak transcription | Osteobl | bone |
| 35 | chr6:28256200-28264400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 36 | chr6:28256200-28264400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 37 | chr6:28256400-28264800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 38 | chr6:28256400-28268400 | Weak transcription | Fetal Intestine Large | intestine |
| 39 | chr6:28256400-28271600 | Weak transcription | Liver | Liver |
| 40 | chr6:28256400-28277800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 41 | chr6:28256600-28264400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 42 | chr6:28256600-28264400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 43 | chr6:28256600-28264400 | Weak transcription | Fetal Intestine Small | intestine |
| 44 | chr6:28256600-28264600 | Weak transcription | Fetal Lung | lung |
| 45 | chr6:28256600-28268200 | Weak transcription | Lung | lung |
| 46 | chr6:28256600-28268600 | Weak transcription | Fetal Thymus | thymus |
| 47 | chr6:28256600-28280800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 48 | chr6:28257400-28261800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 49 | chr6:28257400-28264600 | Weak transcription | Adipose Nuclei | Adipose |
| 50 | chr6:28257600-28261200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
