The 2.0 version of rSNPBase

Variant report

Variant rs11517718
Chromosome Location chr11:8693405-8693406
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8637000-8703200 Weak transcription Small Intestine intestine
2 chr11:8664200-8700400 Weak transcription Stomach Mucosa stomach
3 chr11:8670000-8693600 Weak transcription Psoas Muscle Psoas
4 chr11:8684000-8701600 Strong transcription Primary monocytes fromperipheralblood blood
5 chr11:8684400-8701400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
6 chr11:8689400-8696000 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr11:8689800-8694200 Strong transcription Primary B cells from peripheral blood blood
8 chr11:8690000-8693800 Strong transcription Fetal Intestine Small intestine
9 chr11:8690000-8703000 Weak transcription Placenta Amnion Placenta Amnion
10 chr11:8690400-8694000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr11:8690400-8694000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
12 chr11:8690400-8694200 Strong transcription Primary T cells from cord blood blood
13 chr11:8690400-8694200 Strong transcription Dnd41 blood
14 chr11:8690400-8694600 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr11:8690400-8701200 Strong transcription Primary T cells fromperipheralblood blood
16 chr11:8691200-8694200 Enhancers HMEC breast
17 chr11:8691200-8696400 Strong transcription Primary T helper cells PMA-I stimulated --
18 chr11:8691600-8694400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr11:8691800-8693800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
20 chr11:8691800-8694200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr11:8691800-8694200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr11:8691800-8695800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr11:8692000-8696000 Enhancers Cortex derived primary cultured neurospheres brain
24 chr11:8692400-8693600 Strong transcription Primary T helper naive cells from peripheral blood blood
25 chr11:8692400-8693600 Strong transcription Fetal Thymus thymus
26 chr11:8692400-8693800 Enhancers Brain Germinal Matrix brain
27 chr11:8692400-8694000 Enhancers H1 Cell Line embryonic stem cell
28 chr11:8692400-8694000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr11:8692400-8694000 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr11:8692400-8694000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr11:8692400-8694000 Enhancers Fetal Brain Male brain
32 chr11:8692400-8694000 Strong transcription Fetal Intestine Large intestine
33 chr11:8692400-8694000 Enhancers Fetal Muscle Leg muscle
34 chr11:8692400-8694000 Genic enhancers Skeletal Muscle Male skeletal muscle
35 chr11:8692400-8694000 Strong transcription Thymus Thymus
36 chr11:8692400-8694000 Genic enhancers A549 lung
37 chr11:8692400-8694200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
38 chr11:8692400-8694200 Strong transcription Primary T helper cells fromperipheralblood blood
39 chr11:8692400-8694200 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr11:8692400-8694200 Strong transcription GM12878-XiMat blood
41 chr11:8692400-8694200 Enhancers HSMMtube muscle
42 chr11:8692600-8693600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
43 chr11:8692600-8693600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr11:8692600-8693600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
45 chr11:8692600-8693600 Strong transcription Sigmoid Colon Sigmoid Colon
46 chr11:8692600-8693600 Strong transcription HepG2 liver
47 chr11:8692600-8693600 Flanking Active TSS NH-A brain
48 chr11:8692600-8693800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr11:8692600-8693800 Enhancers Fetal Brain Female brain
50 chr11:8692600-8693800 Enhancers Right Atrium heart

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Last update: Aug 31, 2015