Variant report

Variant rs1154406
Chromosome Location chr4:100008494-100008495
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99977800-100009000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr4:99983200-100008800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr4:99998000-100008800 Weak transcription Brain Inferior Temporal Lobe brain
4 chr4:100001600-100008600 Weak transcription Brain Cingulate Gyrus brain
5 chr4:100002400-100008800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr4:100004000-100008600 Weak transcription Brain Substantia Nigra brain
7 chr4:100004800-100008800 Enhancers Fetal Heart heart
8 chr4:100005600-100008800 Weak transcription Brain Angular Gyrus brain
9 chr4:100005600-100009000 Weak transcription Esophagus oesophagus
10 chr4:100005600-100009200 Weak transcription Placenta Amnion Placenta Amnion
11 chr4:100005600-100009400 Weak transcription Spleen Spleen
12 chr4:100006200-100008800 Weak transcription Brain Anterior Caudate brain
13 chr4:100006200-100008800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr4:100006200-100009000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr4:100006200-100009000 Weak transcription Brain Hippocampus Middle brain
16 chr4:100006200-100009200 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr4:100006400-100008600 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr4:100006600-100008600 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr4:100006600-100008800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr4:100006600-100011400 Active TSS Colonic Mucosa Colon
21 chr4:100006600-100012400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
22 chr4:100006800-100008600 Enhancers Primary T helper cells PMA-I stimulated --
23 chr4:100006800-100008600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr4:100006800-100008600 Enhancers Fetal Brain Male brain
25 chr4:100006800-100008600 Enhancers Small Intestine intestine
26 chr4:100006800-100008800 Weak transcription Primary monocytes fromperipheralblood blood
27 chr4:100006800-100008800 Weak transcription Primary T cells from cord blood blood
28 chr4:100006800-100008800 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr4:100006800-100012400 Active TSS NHLF lung
30 chr4:100007000-100008600 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr4:100007000-100008600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr4:100007000-100008600 Active TSS Rectal Smooth Muscle rectum
33 chr4:100007000-100008800 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr4:100007000-100008800 Weak transcription Psoas Muscle Psoas
35 chr4:100007000-100008800 Active TSS Rectal Mucosa Donor 29 rectum
36 chr4:100007000-100008800 Weak transcription HSMMtube muscle
37 chr4:100007000-100009000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr4:100007000-100009000 Enhancers Primary T cells fromperipheralblood blood
39 chr4:100007000-100009200 Weak transcription Gastric stomach
40 chr4:100007000-100009600 Active TSS Aorta Aorta
41 chr4:100007000-100011600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr4:100007000-100011600 Active TSS Duodenum Mucosa Duodenum
43 chr4:100007200-100008600 Weak transcription Osteobl bone
44 chr4:100007200-100008800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr4:100007200-100009000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr4:100007200-100009000 Weak transcription Left Ventricle heart
47 chr4:100007200-100009000 Weak transcription Right Ventricle heart
48 chr4:100007200-100010800 Active TSS Rectal Mucosa Donor 31 rectum
49 chr4:100007200-100011000 Active TSS Fetal Intestine Small intestine
50 chr4:100007400-100008600 Enhancers Colon Smooth Muscle Colon

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