Variant report

Variant rs1377689
Chromosome Location chr4:100021787-100021788
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:100011400-100025800 Weak transcription Esophagus oesophagus
2 chr4:100011600-100025600 Weak transcription Primary T cells from cord blood blood
3 chr4:100012800-100063800 Weak transcription Aorta Aorta
4 chr4:100014000-100022000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr4:100014400-100024000 Weak transcription HMEC breast
6 chr4:100020400-100024400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr4:100020600-100021800 Enhancers Placenta Placenta
8 chr4:100020600-100022200 Enhancers Placenta Amnion Placenta Amnion
9 chr4:100020600-100034800 Weak transcription Stomach Smooth Muscle stomach
10 chr4:100020800-100022200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr4:100020800-100022800 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr4:100020800-100032800 Weak transcription Fetal Intestine Small intestine
13 chr4:100020800-100038600 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr4:100021000-100022000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr4:100021000-100023600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr4:100021000-100032200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr4:100021000-100041200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr4:100021400-100022200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr4:100021400-100022200 Enhancers HSMMtube muscle
20 chr4:100021400-100022200 Enhancers Osteobl bone
21 chr4:100021400-100022400 Enhancers K562 blood
22 chr4:100021400-100022600 Enhancers Adipose Nuclei Adipose
23 chr4:100021400-100022800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:100021400-100023000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr4:100021400-100025200 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr4:100021600-100022800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr4:100021600-100024400 Weak transcription Small Intestine intestine

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