Variant report

Variant rs11558192
Chromosome Location chr9:139566889-139566890
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139559800-139573800 Weak transcription Fetal Lung lung
2 chr9:139560800-139567600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr9:139560800-139568200 Weak transcription NHLF lung
4 chr9:139560800-139580400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr9:139561200-139569200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr9:139561200-139572600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
7 chr9:139561200-139576400 Weak transcription H9 Cell Line embryonic stem cell
8 chr9:139561200-139576400 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr9:139561400-139568200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr9:139561600-139580400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr9:139561600-139580600 Weak transcription HSMMtube muscle
12 chr9:139561800-139569400 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr9:139561800-139576200 Weak transcription H1 Cell Line embryonic stem cell
14 chr9:139562000-139569200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr9:139562400-139570600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr9:139562400-139571000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr9:139562600-139576000 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr9:139562800-139567000 Weak transcription Gastric stomach
19 chr9:139562800-139573800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr9:139563000-139569800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr9:139563000-139580400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr9:139563400-139567000 Enhancers Pancreas Pancrea
23 chr9:139563600-139579600 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr9:139563800-139568000 Weak transcription Placenta Amnion Placenta Amnion
25 chr9:139564200-139580200 Weak transcription Small Intestine intestine
26 chr9:139564600-139568200 Weak transcription Fetal Thymus thymus
27 chr9:139564800-139568600 Weak transcription Colon Smooth Muscle Colon
28 chr9:139564800-139569000 Weak transcription K562 blood
29 chr9:139564800-139570000 Genic enhancers Fetal Intestine Small intestine
30 chr9:139564800-139571000 Weak transcription Brain Inferior Temporal Lobe brain
31 chr9:139564800-139574000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr9:139565000-139567000 Weak transcription Primary monocytes fromperipheralblood blood
33 chr9:139565000-139568200 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr9:139565000-139568600 Enhancers Liver Liver
35 chr9:139565000-139573000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr9:139565000-139579400 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr9:139565200-139567000 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr9:139565200-139567000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr9:139565200-139567200 Enhancers Primary hematopoietic stem cells blood
40 chr9:139565200-139567200 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr9:139565200-139568000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr9:139565400-139567400 Weak transcription Adipose Nuclei Adipose
43 chr9:139565400-139568200 Genic enhancers Fetal Muscle Trunk muscle
44 chr9:139565400-139568400 Genic enhancers Fetal Muscle Leg muscle
45 chr9:139565400-139569000 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr9:139565400-139574400 Strong transcription Fetal Stomach stomach
47 chr9:139565600-139569200 Strong transcription Spleen Spleen
48 chr9:139565800-139567000 Strong transcription HUVEC blood vessel
49 chr9:139565800-139567400 Weak transcription Thymus Thymus
50 chr9:139566000-139567000 Flanking Bivalent TSS/Enh HepG2 liver

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