Variant report

Variant rs17848854
Chromosome Location chr9:139571657-139571658
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:139559800-139573800 Weak transcription Fetal Lung lung
2 chr9:139560800-139580400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr9:139561200-139572600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:139561200-139576400 Weak transcription H9 Cell Line embryonic stem cell
5 chr9:139561200-139576400 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr9:139561600-139580400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr9:139561600-139580600 Weak transcription HSMMtube muscle
8 chr9:139561800-139576200 Weak transcription H1 Cell Line embryonic stem cell
9 chr9:139562600-139576000 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr9:139562800-139573800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr9:139563000-139580400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr9:139563600-139579600 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr9:139564200-139580200 Weak transcription Small Intestine intestine
14 chr9:139564800-139574000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr9:139565000-139573000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr9:139565000-139579400 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr9:139565400-139574400 Strong transcription Fetal Stomach stomach
18 chr9:139566600-139572800 Strong transcription Lung lung
19 chr9:139566600-139573200 Weak transcription Brain Hippocampus Middle brain
20 chr9:139566600-139580000 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr9:139566800-139572000 Strong transcription Stomach Smooth Muscle stomach
22 chr9:139566800-139572200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr9:139566800-139576600 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr9:139567000-139571800 Strong transcription Esophagus oesophagus
25 chr9:139567000-139572000 Strong transcription Primary monocytes fromperipheralblood blood
26 chr9:139567000-139572000 Strong transcription Primary neutrophils fromperipheralblood blood
27 chr9:139567000-139572000 Genic enhancers Pancreas Pancrea
28 chr9:139567000-139579600 Weak transcription HUVEC blood vessel
29 chr9:139567000-139579800 Weak transcription Dnd41 blood
30 chr9:139567200-139571800 Strong transcription Skeletal Muscle Male skeletal muscle
31 chr9:139567200-139571800 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr9:139567400-139572000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
33 chr9:139567400-139573600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr9:139567400-139579800 Weak transcription Rectal Smooth Muscle rectum
35 chr9:139567600-139572800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr9:139567800-139572000 Strong transcription Right Ventricle heart
37 chr9:139567800-139573200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr9:139567800-139576200 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr9:139567800-139580600 Weak transcription Primary T cells from cord blood blood
40 chr9:139568200-139572800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr9:139568600-139571800 Strong transcription Colon Smooth Muscle Colon
42 chr9:139569000-139571800 Genic enhancers Rectal Mucosa Donor 31 rectum
43 chr9:139569000-139580200 Weak transcription NHDF-Ad bronchial
44 chr9:139569200-139572600 Weak transcription Primary B cells from cord blood blood
45 chr9:139569400-139573600 Weak transcription HMEC breast
46 chr9:139569400-139577200 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr9:139569400-139580000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr9:139569400-139580000 Weak transcription Placenta Amnion Placenta Amnion
49 chr9:139569600-139574000 Weak transcription Muscle Satellite Cultured Cells --
50 chr9:139569600-139580200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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