Variant report

Variant	rs1157411
Chromosome Location	chr8:108490998-108490999
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10096335	0.83[CHB][hapmap];0.91[JPT][hapmap];0.82[ASN][1000 genomes]
rs10098499	0.90[JPT][hapmap];0.81[ASN][1000 genomes]
rs1157412	0.82[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs1368489	0.80[EUR][1000 genomes]
rs1433168	0.82[CHB][hapmap];0.90[JPT][hapmap];0.83[ASN][1000 genomes]
rs1433170	0.88[CEU][hapmap]
rs4734972	0.80[EUR][1000 genomes]
rs55638121	0.83[ASN][1000 genomes]
rs951759	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:108482800-108495600	Weak transcription	Fetal Lung	lung
2	chr8:108489400-108496600	Weak transcription	Ovary	ovary
3	chr8:108489600-108492200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr8:108489600-108494600	Weak transcription	Colon Smooth Muscle	Colon
5	chr8:108489800-108493000	Weak transcription	Primary hematopoietic stem cells	blood
6	chr8:108489800-108497000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr8:108490400-108492400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
8	chr8:108490800-108492000	Enhancers	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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