Variant report

Variant	rs11583952
Chromosome Location	chr1:197935915-197935916
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10922333	0.88[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs10922334	0.88[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs12727777	0.87[ASN][1000 genomes]
rs12729300	0.89[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs1909507	0.86[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs2358777	0.89[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs3894699	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:197935000-197936200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr1:197935000-197937200	Enhancers	Hela-S3	cervix

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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