The 2.0 version of rSNPBase

Variant report

Variant rs11584481
Chromosome Location chr1:175918482-175918483
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175874400-175945600 Weak transcription A549 lung
2 chr1:175880000-175937800 Weak transcription HSMMtube muscle
3 chr1:175881000-175924200 Weak transcription Brain Angular Gyrus brain
4 chr1:175886400-175929400 Weak transcription Brain Inferior Temporal Lobe brain
5 chr1:175887800-175929800 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr1:175889200-175937800 Weak transcription Osteobl bone
7 chr1:175892400-175940600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:175893200-175943000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:175897000-175953000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:175897600-175953200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:175897800-175952400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:175898600-175953200 Weak transcription Pancreas Pancrea
13 chr1:175899200-175953200 Weak transcription Esophagus oesophagus
14 chr1:175901600-175940600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:175901800-175925800 Weak transcription HUVEC blood vessel
16 chr1:175902800-175931800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:175903200-175924200 Weak transcription Gastric stomach
18 chr1:175903400-175951400 Weak transcription K562 blood
19 chr1:175903600-175940800 Weak transcription HMEC breast
20 chr1:175904200-175956200 Weak transcription Psoas Muscle Psoas
21 chr1:175904600-175953000 Weak transcription Right Ventricle heart
22 chr1:175905000-175946800 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr1:175905400-175918800 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr1:175905600-175918800 Weak transcription H9 Cell Line embryonic stem cell
25 chr1:175906000-175930000 Weak transcription H1 Cell Line embryonic stem cell
26 chr1:175906200-175919000 Weak transcription Fetal Brain Male brain
27 chr1:175906400-175920800 Weak transcription HepG2 liver
28 chr1:175906400-175940600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:175906400-175944800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:175906400-175952400 Weak transcription Spleen Spleen
31 chr1:175906400-175962600 Weak transcription NH-A brain
32 chr1:175906600-175921200 Weak transcription Fetal Stomach stomach
33 chr1:175906800-175921000 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:175906800-175952000 Weak transcription Stomach Smooth Muscle stomach
35 chr1:175907400-175921200 Strong transcription Primary monocytes fromperipheralblood blood
36 chr1:175907400-175950600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr1:175907800-175937400 Weak transcription NHLF lung
38 chr1:175907800-175940600 Weak transcription Colonic Mucosa Colon
39 chr1:175907800-175945400 Weak transcription Small Intestine intestine
40 chr1:175907800-175945600 Weak transcription Muscle Satellite Cultured Cells --
41 chr1:175908000-175920000 Weak transcription Fetal Intestine Small intestine
42 chr1:175908000-175959400 Weak transcription NHEK skin
43 chr1:175908200-175939400 Weak transcription Brain Cingulate Gyrus brain
44 chr1:175908400-175919000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:175909400-175948000 Weak transcription Colon Smooth Muscle Colon
46 chr1:175909600-175920600 Weak transcription Fetal Muscle Trunk muscle
47 chr1:175909600-175921000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr1:175909600-175924200 Weak transcription Brain Anterior Caudate brain
49 chr1:175909600-175924200 Weak transcription Rectal Smooth Muscle rectum
50 chr1:175909600-175932200 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015