The 2.0 version of rSNPBase

Variant report

Variant rs11590045
Chromosome Location chr1:175963833-175963834
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175946000-175996000 Weak transcription HMEC breast
2 chr1:175953800-175999600 Weak transcription Colonic Mucosa Colon
3 chr1:175954000-175977800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:175954000-175978000 Weak transcription Left Ventricle heart
5 chr1:175954000-175987800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:175954600-175964600 Weak transcription Muscle Satellite Cultured Cells --
7 chr1:175954800-175968600 Weak transcription Fetal Muscle Leg muscle
8 chr1:175957000-175981200 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr1:175957600-175977400 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:175957600-175977400 Weak transcription HSMM muscle
11 chr1:175957800-175971200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:175957800-176022000 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr1:175958000-175964000 Weak transcription Primary T cells from cord blood blood
14 chr1:175958000-175965000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:175958000-175977200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:175958000-175977200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:175958000-175977400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:175958000-175987800 Weak transcription Fetal Thymus thymus
19 chr1:175958200-175978000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr1:175958400-175968200 Weak transcription Fetal Lung lung
21 chr1:175958600-175964200 Weak transcription Primary B cells from peripheral blood blood
22 chr1:175958600-175965200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr1:175958600-175977400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:175958600-175977400 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr1:175958600-175977400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:175958600-175977400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr1:175958800-175965400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:175958800-175980600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:175959000-175966200 Weak transcription Liver Liver
30 chr1:175959200-175977400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:175959400-175977400 Weak transcription Dnd41 blood
32 chr1:175960000-175977400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:175961000-175971600 Weak transcription Primary B cells from cord blood blood
34 chr1:175961000-175977600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:175961200-175977600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:175962400-175977800 Weak transcription Primary hematopoietic stem cells blood
37 chr1:175962400-175977800 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015