Variant report

Variant rs11588753
Chromosome Location chr1:146714427-146714428
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:146713800-146715000 Active TSS Fetal Brain Female brain
2 chr1:146713800-146715400 Active TSS Duodenum Smooth Muscle Duodenum
3 chr1:146713800-146715400 Active TSS Rectal Smooth Muscle rectum
4 chr1:146713800-146715600 Active TSS Colonic Mucosa Colon
5 chr1:146713800-146715600 Active TSS Fetal Muscle Trunk muscle
6 chr1:146713800-146715600 Active TSS Psoas Muscle Psoas
7 chr1:146713800-146715800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:146713800-146715800 Active TSS iPS-18 Cell Line embryonic stem cell
9 chr1:146713800-146715800 Active TSS Pancreatic Islets Pancreatic Islet
10 chr1:146713800-146715800 Active TSS HSMMtube muscle
11 chr1:146713800-146716000 Active TSS ES-I3 Cell Line embryonic stem cell
12 chr1:146713800-146716000 Active TSS H1 Cell Line embryonic stem cell
13 chr1:146713800-146716000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:146713800-146716000 Active TSS Right Ventricle heart
15 chr1:146714000-146715000 Transcr. at gene 5' and 3' Right Atrium heart
16 chr1:146714000-146715200 Active TSS Primary hematopoietic stem cells short term culture blood
17 chr1:146714000-146715400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:146714000-146715400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:146714000-146715400 Active TSS Brain Angular Gyrus brain
20 chr1:146714000-146715400 Active TSS Brain Substantia Nigra brain
21 chr1:146714000-146715400 Active TSS Left Ventricle heart
22 chr1:146714000-146715400 Active TSS Placenta Amnion Placenta Amnion
23 chr1:146714000-146715600 Active TSS H9 Cell Line embryonic stem cell
24 chr1:146714000-146715600 Active TSS iPS-15b Cell Line embryonic stem cell
25 chr1:146714000-146715600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:146714000-146715600 Active TSS Brain Anterior Caudate brain
27 chr1:146714000-146715600 Active TSS Ovary ovary
28 chr1:146714000-146715800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:146714000-146715800 Active TSS Aorta Aorta
30 chr1:146714000-146715800 Active TSS Brain Hippocampus Middle brain
31 chr1:146714000-146715800 Active TSS Fetal Thymus thymus
32 chr1:146714000-146715800 Active TSS A549 lung
33 chr1:146714000-146716000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:146714000-146716000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:146714000-146716000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:146714000-146716200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:146714000-146716200 Active TSS NHDF-Ad bronchial
38 chr1:146714000-146716400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:146714200-146714600 Active TSS Primary B cells from cord blood blood
40 chr1:146714200-146714800 Active TSS Primary neutrophils fromperipheralblood blood
41 chr1:146714200-146714800 Active TSS Primary T helper cells fromperipheralblood blood
42 chr1:146714200-146714800 Active TSS Skeletal Muscle Female skeletal muscle
43 chr1:146714200-146714800 Active TSS HepG2 liver
44 chr1:146714200-146715000 Active TSS Primary T cells from cord blood blood
45 chr1:146714200-146715000 Active TSS Primary T helper memory cells from peripheral blood 1 blood
46 chr1:146714200-146715000 Active TSS Primary T regulatory cells fromperipheralblood blood
47 chr1:146714200-146715000 Active TSS Placenta Placenta
48 chr1:146714200-146715000 Active TSS Monocytes-CD14+_RO01746 blood
49 chr1:146714200-146715200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:146714200-146715200 Active TSS Primary monocytes fromperipheralblood blood

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