The 2.0 version of rSNPBase

Variant report

Variant rs11589775
Chromosome Location chr1:214470619-214470620
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214455600-214487800 Weak transcription Primary B cells from cord blood blood
2 chr1:214455600-214489000 Weak transcription Ovary ovary
3 chr1:214456400-214491800 Weak transcription Pancreas Pancrea
4 chr1:214456600-214483200 Weak transcription Primary B cells from peripheral blood blood
5 chr1:214457200-214478200 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr1:214459200-214483000 Weak transcription Liver Liver
7 chr1:214459200-214491400 Weak transcription Duodenum Mucosa Duodenum
8 chr1:214461400-214475800 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr1:214461600-214475600 Weak transcription Primary T cells fromperipheralblood blood
10 chr1:214461600-214483000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:214461800-214482800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:214462000-214471400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr1:214462000-214491800 Weak transcription NHEK skin
14 chr1:214462400-214475800 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:214462600-214483200 Weak transcription Dnd41 blood
16 chr1:214463200-214475800 Weak transcription Primary T cells from cord blood blood
17 chr1:214463400-214478200 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr1:214463600-214479400 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr1:214464000-214478600 Weak transcription Lung lung
20 chr1:214465800-214475800 Weak transcription Right Ventricle heart
21 chr1:214466400-214478400 Weak transcription Fetal Intestine Small intestine
22 chr1:214467800-214471600 Enhancers Fetal Heart heart
23 chr1:214468000-214470800 Enhancers Skeletal Muscle Female skeletal muscle
24 chr1:214468400-214471000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:214468400-214471000 Enhancers Adipose Nuclei Adipose
26 chr1:214468400-214471200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr1:214468400-214471600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
28 chr1:214468600-214471200 Enhancers Skeletal Muscle Male skeletal muscle
29 chr1:214468800-214471000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:214469000-214475800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr1:214469200-214471000 Bivalent Enhancer H1 Cell Line embryonic stem cell
32 chr1:214469200-214471400 Enhancers Muscle Satellite Cultured Cells --
33 chr1:214469400-214471000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr1:214469400-214471000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:214469400-214471000 Enhancers NHDF-Ad bronchial
36 chr1:214469400-214471400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:214469400-214474800 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr1:214469400-214488600 Weak transcription Fetal Thymus thymus
39 chr1:214469600-214470800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:214469600-214471000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr1:214469600-214471000 Enhancers Hela-S3 cervix
42 chr1:214469600-214471000 Enhancers HSMM muscle
43 chr1:214469600-214471200 Enhancers Osteobl bone
44 chr1:214469600-214471600 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr1:214469600-214482200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:214469600-214488400 Weak transcription Thymus Thymus
47 chr1:214469800-214471000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr1:214469800-214471000 Enhancers Fetal Lung lung
49 chr1:214469800-214471200 Enhancers HUVEC blood vessel
50 chr1:214469800-214471200 Enhancers NHLF lung

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Last update: Aug 31, 2015