Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11577080	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11577500	0.86[EUR][1000 genomes]
rs11579174	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11588303	0.86[EUR][1000 genomes]
rs11588357	0.86[EUR][1000 genomes]
rs11588746	0.86[EUR][1000 genomes]
rs11588928	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11589323	0.86[EUR][1000 genomes]
rs11589814	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11589963	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11589997	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11590034	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17011133	0.80[ASN][1000 genomes]
rs17011142	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17011162	0.93[ASN][1000 genomes]
rs56779601	0.93[ASN][1000 genomes]
rs56905116	0.80[ASN][1000 genomes]
rs57015712	0.80[ASN][1000 genomes]
rs57162743	0.86[EUR][1000 genomes]
rs58183247	0.93[ASN][1000 genomes]
rs58687635	0.80[ASN][1000 genomes]
rs58766825	0.91[ASN][1000 genomes]
rs59610764	0.93[ASN][1000 genomes]
rs60180955	0.89[ASN][1000 genomes]
rs60321950	0.80[ASN][1000 genomes]
rs60602367	0.85[ASN][1000 genomes]
rs60617250	0.80[ASN][1000 genomes]
rs60839601	0.85[ASN][1000 genomes]
rs60965848	0.80[ASN][1000 genomes]
rs74145036	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv945304	chr1:222114347-222131255	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:222115400-222131600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr1:222123400-222129400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr1:222123800-222131200	Weak transcription	HSMM	muscle
4	chr1:222126200-222133400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr1:222128200-222133000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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