Variant report

Variant	rs11599105
Chromosome Location	chr10:97740223-97740224
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12761082	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12762284	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12765198	0.81[CEU][hapmap];0.83[EUR][1000 genomes]
rs12769120	1.00[CEU][hapmap]
rs12775584	0.87[CEU][hapmap];0.82[YRI][hapmap];0.84[EUR][1000 genomes]
rs34777055	0.86[EUR][1000 genomes]
rs35298116	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs35864527	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs66530311	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs66851219	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs67166869	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs67870248	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761619	chr10:97719520-97746180	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links