Variant report

Variant	rs34777055
Chromosome Location	chr10:97736151-97736152
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10509697	0.91[EUR][1000 genomes]
rs11599105	0.86[EUR][1000 genomes]
rs12761082	0.83[EUR][1000 genomes]
rs12762284	0.82[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs12765198	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12775584	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35298116	0.83[EUR][1000 genomes]
rs35557930	0.89[EUR][1000 genomes]
rs35864527	0.82[EUR][1000 genomes]
rs57635810	0.89[EUR][1000 genomes]
rs66530311	0.83[EUR][1000 genomes]
rs66851219	0.93[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs67166869	0.83[EUR][1000 genomes]
rs67870248	0.93[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs7904176	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761619	chr10:97719520-97746180	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97725400-97736200	Weak transcription	GM12878-XiMat	blood
2	chr10:97735600-97736200	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr10:97735800-97736200	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr10:97735800-97736200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr10:97735800-97736800	Enhancers	Primary hematopoietic stem cells	blood
6	chr10:97735800-97736800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr10:97735800-97737000	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr10:97735800-97737200	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr10:97736000-97736200	Flanking Active TSS	HepG2	liver
10	chr10:97736000-97736200	Enhancers	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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