Variant report

Variant	rs11599327
Chromosome Location	chr10:18614066-18614067
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11013624	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[TSI][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11592650	0.85[CHD][hapmap];0.80[GIH][hapmap];1.00[JPT][hapmap]
rs17611696	0.82[JPT][hapmap]
rs4747341	0.96[ASN][1000 genomes]
rs61839208	0.86[ASN][1000 genomes]
rs7894306	0.93[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs11599327	NMT2	cis	parietal	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18602400-18614600	Weak transcription	Pancreas	Pancrea
2	chr10:18602600-18614600	Weak transcription	Ovary	ovary
3	chr10:18603000-18614800	Weak transcription	Aorta	Aorta
4	chr10:18613000-18614800	Weak transcription	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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