Variant report

Variant rs11675942
Chromosome Location chr2:86507688-86507689
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86499000-86510800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr2:86499200-86509600 Weak transcription Aorta Aorta
3 chr2:86500000-86517400 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr2:86502800-86510400 Weak transcription Hela-S3 cervix
5 chr2:86502800-86513600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr2:86503400-86508200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr2:86503400-86510800 Weak transcription Colonic Mucosa Colon
8 chr2:86503800-86510600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr2:86505800-86508200 Enhancers Right Atrium heart
10 chr2:86506200-86508400 Enhancers Skeletal Muscle Female skeletal muscle
11 chr2:86506200-86508600 Enhancers Fetal Muscle Leg muscle
12 chr2:86506200-86509200 Enhancers Psoas Muscle Psoas
13 chr2:86506200-86512400 Enhancers Left Ventricle heart
14 chr2:86506400-86508400 Genic enhancers Brain Germinal Matrix brain
15 chr2:86506400-86508400 Enhancers Fetal Stomach stomach
16 chr2:86506400-86509000 Genic enhancers Fetal Brain Female brain
17 chr2:86506600-86507800 Genic enhancers Fetal Intestine Large intestine
18 chr2:86506600-86508000 Genic enhancers Fetal Intestine Small intestine
19 chr2:86506600-86508400 Enhancers Fetal Heart heart
20 chr2:86506600-86508400 Enhancers Rectal Smooth Muscle rectum
21 chr2:86506600-86511800 Enhancers Duodenum Smooth Muscle Duodenum
22 chr2:86506800-86507800 Enhancers Small Intestine intestine
23 chr2:86506800-86508000 Enhancers Brain Cingulate Gyrus brain
24 chr2:86506800-86508400 Flanking Active TSS Stomach Smooth Muscle stomach
25 chr2:86506800-86508400 Enhancers HSMMtube muscle
26 chr2:86506800-86508600 Enhancers Fetal Brain Male brain
27 chr2:86506800-86513200 Enhancers Colon Smooth Muscle Colon
28 chr2:86507000-86507800 Enhancers Adipose Nuclei Adipose
29 chr2:86507000-86508000 Enhancers Brain Anterior Caudate brain
30 chr2:86507000-86508200 Enhancers Duodenum Mucosa Duodenum
31 chr2:86507000-86508800 Enhancers Fetal Muscle Trunk muscle
32 chr2:86507000-86509000 Enhancers Fetal Lung lung
33 chr2:86507200-86507800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr2:86507200-86507800 Enhancers Esophagus oesophagus
35 chr2:86507200-86507800 Enhancers Rectal Mucosa Donor 29 rectum
36 chr2:86507200-86508000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr2:86507200-86508200 Enhancers Brain Inferior Temporal Lobe brain
38 chr2:86507200-86508400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr2:86507400-86507800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr2:86507400-86507800 Bivalent Enhancer Muscle Satellite Cultured Cells --
41 chr2:86507400-86508000 Enhancers Brain Angular Gyrus brain
42 chr2:86507400-86508200 Enhancers Cortex derived primary cultured neurospheres brain
43 chr2:86507400-86508200 Enhancers Skeletal Muscle Male skeletal muscle
44 chr2:86507400-86509600 Weak transcription Right Ventricle heart
45 chr2:86507400-86510000 Weak transcription Placenta Placenta
46 chr2:86507600-86507800 Enhancers HUES64 Cell Line embryonic stem cell
47 chr2:86507600-86507800 Bivalent Enhancer NHEK skin
48 chr2:86507600-86507800 Bivalent Enhancer Osteobl bone
49 chr2:86507600-86508000 Flanking Active TSS HSMM muscle
50 chr2:86507600-86511000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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