Variant report

Variant rs12988844
Chromosome Location chr2:86479035-86479036
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86459800-86479200 Weak transcription Esophagus oesophagus
2 chr2:86460800-86479400 Weak transcription Brain Anterior Caudate brain
3 chr2:86463000-86482000 Weak transcription Psoas Muscle Psoas
4 chr2:86468400-86481600 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr2:86468800-86482400 Weak transcription Gastric stomach
6 chr2:86470800-86482000 Weak transcription Aorta Aorta
7 chr2:86471800-86482000 Weak transcription Right Atrium heart
8 chr2:86472000-86497200 Weak transcription Fetal Intestine Large intestine
9 chr2:86472200-86482000 Weak transcription Pancreas Pancrea
10 chr2:86472400-86479400 Weak transcription Stomach Mucosa stomach
11 chr2:86472400-86484800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr2:86476000-86479800 Enhancers Rectal Smooth Muscle rectum
13 chr2:86476400-86479600 Enhancers Duodenum Smooth Muscle Duodenum
14 chr2:86476800-86481800 Weak transcription H9 Cell Line embryonic stem cell
15 chr2:86477000-86480800 Strong transcription Fetal Intestine Small intestine
16 chr2:86477400-86481600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr2:86477400-86481800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr2:86477400-86481800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:86477600-86479600 Enhancers Colon Smooth Muscle Colon
20 chr2:86477600-86481800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr2:86477600-86481800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr2:86477600-86482000 Weak transcription Duodenum Mucosa Duodenum
23 chr2:86477800-86479400 Genic enhancers Fetal Muscle Leg muscle
24 chr2:86477800-86479800 Enhancers Brain Inferior Temporal Lobe brain
25 chr2:86477800-86493200 Weak transcription Fetal Muscle Trunk muscle
26 chr2:86478000-86479600 Enhancers Fetal Adrenal Gland Adrenal Gland
27 chr2:86478200-86479400 Strong transcription Brain Germinal Matrix brain
28 chr2:86478200-86480800 Strong transcription HSMMtube muscle
29 chr2:86478200-86481800 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr2:86478200-86482400 Weak transcription Fetal Brain Male brain
31 chr2:86478200-86483200 Enhancers Fetal Heart heart
32 chr2:86478200-86498600 Weak transcription Brain Angular Gyrus brain
33 chr2:86478400-86479400 Genic enhancers Fetal Brain Female brain
34 chr2:86478400-86491400 Weak transcription Brain Cingulate Gyrus brain
35 chr2:86478600-86480000 Enhancers Stomach Smooth Muscle stomach
36 chr2:86478800-86479200 Flanking Bivalent TSS/Enh HepG2 liver
37 chr2:86478800-86479400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr2:86479000-86479200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr2:86479000-86479200 Enhancers Lung lung
40 chr2:86479000-86479200 Bivalent Enhancer K562 blood
41 chr2:86479000-86479400 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr2:86479000-86479400 Bivalent Enhancer HUVEC blood vessel
43 chr2:86479000-86479600 Enhancers Fetal Stomach stomach
44 chr2:86479000-86479600 Enhancers Skeletal Muscle Female skeletal muscle
45 chr2:86479000-86479800 Enhancers Right Ventricle heart
46 chr2:86479000-86480800 Enhancers Left Ventricle heart

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