Variant report

Variant	rs11683188
Chromosome Location	chr2:99724512-99724513
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:99720605..99722311-chr2:99723972..99725744,2	K562	blood:
2	chr2:99721431..99723129-chr2:99723599..99725832,2	MCF-7	breast:

Extended variants
information (count: 164 )
Associated
traits (count: 19 )

rSNPs within LD-proxies of this variant (count:162)

rs_ID	r²[population]
rs10167390	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs10170063	0.87[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs10181344	0.91[ASW][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];0.97[MKK][hapmap];0.80[TSI][hapmap];1.00[YRI][hapmap]
rs10181422	0.81[ASN][1000 genomes]
rs1044575	0.83[EUR][1000 genomes]
rs10865029	0.88[CEU][hapmap];0.87[EUR][1000 genomes]
rs11123761	0.88[CEU][hapmap];0.86[GIH][hapmap];0.86[TSI][hapmap];0.87[EUR][1000 genomes]
rs11123762	0.87[EUR][1000 genomes]
rs11123763	0.87[EUR][1000 genomes]
rs11123764	0.86[EUR][1000 genomes]
rs11123765	0.88[CEU][hapmap];0.90[EUR][1000 genomes]
rs11123766	0.84[EUR][1000 genomes]
rs11123770	0.93[EUR][1000 genomes]
rs1115756	0.91[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs1115757	0.93[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs1133977	0.83[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.82[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1133978	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11674894	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs11677247	0.88[CEU][hapmap];0.85[EUR][1000 genomes]
rs11678456	0.86[EUR][1000 genomes]
rs11683107	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.82[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11685759	0.90[EUR][1000 genomes]
rs11688004	0.83[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11689265	0.88[CEU][hapmap];0.93[GIH][hapmap];0.81[MKK][hapmap];0.91[TSI][hapmap];0.89[EUR][1000 genomes]
rs11692336	0.93[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11692669	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11692699	0.88[CEU][hapmap];0.86[GIH][hapmap];0.86[TSI][hapmap];0.87[EUR][1000 genomes]
rs11693427	0.82[EUR][1000 genomes]
rs11695379	0.88[CEU][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.87[EUR][1000 genomes]
rs11695751	0.88[CEU][hapmap];0.93[GIH][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes]
rs11883676	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs11890338	0.85[EUR][1000 genomes]
rs11895749	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11900670	0.87[EUR][1000 genomes]
rs11903311	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12470471	0.91[ASW][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.96[LWK][hapmap];0.97[MKK][hapmap];0.80[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12613624	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12619780	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12621007	0.89[EUR][1000 genomes]
rs12987548	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12991189	0.89[EUR][1000 genomes]
rs12992218	0.85[EUR][1000 genomes]
rs12992930	0.84[EUR][1000 genomes]
rs12995473	0.87[CEU][hapmap];0.84[EUR][1000 genomes]
rs12999417	0.84[CEU][hapmap];0.91[GIH][hapmap];0.81[TSI][hapmap];0.81[EUR][1000 genomes]
rs13000731	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13004491	0.85[EUR][1000 genomes]
rs13008171	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13008496	0.86[CEU][hapmap]
rs13009147	0.86[CEU][hapmap];0.82[EUR][1000 genomes]
rs13012481	0.84[EUR][1000 genomes]
rs13018891	0.88[CEU][hapmap];0.85[EUR][1000 genomes]
rs13020339	0.82[EUR][1000 genomes]
rs13022329	0.87[EUR][1000 genomes]
rs13023501	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13023744	0.93[EUR][1000 genomes]
rs13026928	0.84[EUR][1000 genomes]
rs13030961	0.88[CEU][hapmap];0.88[EUR][1000 genomes]
rs13031919	0.87[EUR][1000 genomes]
rs13033012	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13035311	0.88[CEU][hapmap];0.87[EUR][1000 genomes]
rs13035357	0.99[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13407840	0.83[ASN][1000 genomes]
rs13798	0.87[CEU][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.83[EUR][1000 genomes]
rs1453563	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1453564	0.82[ASN][1000 genomes]
rs1563106	0.87[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1563107	1.00[ASW][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];0.99[MKK][hapmap];0.80[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1563108	0.83[ASW][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];0.95[JPT][hapmap];0.82[LWK][hapmap];0.89[MKK][hapmap];0.80[TSI][hapmap];0.87[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs17708262	0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs17759607	0.96[CEU][hapmap];0.94[CHB][hapmap];0.95[JPT][hapmap];0.82[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2084988	0.95[CHB][hapmap];0.90[JPT][hapmap];0.81[YRI][hapmap];0.85[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs2123686	0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs2171359	0.88[CEU][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.83[EUR][1000 genomes]
rs2171362	0.80[EUR][1000 genomes]
rs2309581	0.88[CEU][hapmap];0.84[GIH][hapmap];0.84[TSI][hapmap];0.84[EUR][1000 genomes]
rs2516827	0.88[CEU][hapmap];0.85[EUR][1000 genomes]
rs2516828	0.84[EUR][1000 genomes]
rs2516829	0.87[CEU][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.84[EUR][1000 genomes]
rs2516830	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2516832	0.88[CEU][hapmap];0.85[EUR][1000 genomes]
rs2516833	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2516834	0.87[CEU][hapmap];0.88[EUR][1000 genomes]
rs2516835	1.00[ASW][hapmap];0.96[CEU][hapmap];0.90[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2516836	0.83[EUR][1000 genomes]
rs2632260	0.88[CEU][hapmap];0.90[EUR][1000 genomes]
rs2632261	0.84[EUR][1000 genomes]
rs2632277	0.91[CEU][hapmap];0.80[MKK][hapmap];0.91[TSI][hapmap];0.90[EUR][1000 genomes]
rs2632283	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2632284	0.88[EUR][1000 genomes]
rs28648058	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2964969	0.84[EUR][1000 genomes]
rs2969379	0.90[EUR][1000 genomes]
rs34252185	0.93[EUR][1000 genomes]
rs34272114	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34766932	0.86[EUR][1000 genomes]
rs35461437	0.80[EUR][1000 genomes]
rs36071868	0.93[EUR][1000 genomes]
rs4340581	0.88[CEU][hapmap];0.92[EUR][1000 genomes]
rs4347885	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4374423	0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs4402818	0.87[EUR][1000 genomes]
rs4588238	0.88[CEU][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.86[EUR][1000 genomes]
rs4850897	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4851183	0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs4851185	1.00[ASW][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];0.99[MKK][hapmap];0.80[TSI][hapmap];1.00[YRI][hapmap]
rs4851187	0.88[CEU][hapmap];0.93[GIH][hapmap];0.91[TSI][hapmap];0.91[EUR][1000 genomes]
rs4851188	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.82[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62154638	0.91[ASN][1000 genomes]
rs6542846	0.82[ASN][1000 genomes]
rs6542863	0.87[EUR][1000 genomes]
rs6542864	0.88[CEU][hapmap];0.86[GIH][hapmap];0.86[TSI][hapmap];0.87[EUR][1000 genomes]
rs6542865	0.88[CEU][hapmap];0.85[EUR][1000 genomes]
rs6542866	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.82[YRI][hapmap];0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6542868	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6542869	0.83[EUR][1000 genomes]
rs6542870	0.84[EUR][1000 genomes]
rs6707462	0.85[CHB][hapmap];0.95[JPT][hapmap];0.86[ASN][1000 genomes]
rs6708576	0.88[CEU][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.83[EUR][1000 genomes]
rs6708878	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6712704	0.87[EUR][1000 genomes]
rs6717723	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs6717729	0.88[CEU][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.84[EUR][1000 genomes]
rs6722164	0.81[ASN][1000 genomes]
rs6724476	0.82[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs6727749	1.00[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6733285	0.96[CEU][hapmap];0.87[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap]
rs6735801	0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs6737257	0.90[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs6739579	0.87[EUR][1000 genomes]
rs6740054	0.83[ASN][1000 genomes]
rs6741772	0.88[CEU][hapmap]
rs6741773	0.81[EUR][1000 genomes]
rs6743355	0.87[EUR][1000 genomes]
rs6750876	0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap]
rs6751927	0.90[CEU][hapmap];0.92[EUR][1000 genomes]
rs6753063	0.87[CEU][hapmap];0.84[EUR][1000 genomes]
rs6753650	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6754843	0.94[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs6756650	0.87[CEU][hapmap];0.84[EUR][1000 genomes]
rs6756880	0.95[JPT][hapmap];1.00[YRI][hapmap]
rs6757661	0.84[EUR][1000 genomes]
rs720228	0.92[CEU][hapmap];0.93[GIH][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes]
rs720229	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7349217	0.88[CEU][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.81[EUR][1000 genomes]
rs7558004	0.83[EUR][1000 genomes]
rs7570657	0.90[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs7571390	1.00[ASW][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];0.96[MKK][hapmap];0.80[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7572660	0.84[EUR][1000 genomes]
rs7577477	0.88[CEU][hapmap];0.87[EUR][1000 genomes]
rs7584809	0.88[EUR][1000 genomes]
rs7586608	0.95[CHB][hapmap];0.95[JPT][hapmap];0.85[YRI][hapmap];0.81[ASN][1000 genomes]
rs7588059	0.82[ASN][1000 genomes]
rs7591794	0.83[ASN][1000 genomes]
rs7604557	0.92[EUR][1000 genomes]
rs7605734	0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs7605843	0.88[CEU][hapmap];0.83[EUR][1000 genomes]
rs7606635	1.00[ASW][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];0.99[MKK][hapmap];0.80[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs7608938	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8179690	0.88[CEU][hapmap];0.86[GIH][hapmap];0.84[TSI][hapmap];0.83[EUR][1000 genomes]
rs9710648	1.00[ASW][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];1.00[LWK][hapmap];0.97[MKK][hapmap];0.80[TSI][hapmap];1.00[YRI][hapmap]
rs9941561	0.88[CEU][hapmap];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007718	chr2:99542281-99729107	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv431424	chr2:99652682-100494682	Flanking Active TSS Enhancers Strong transcription Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases

mRNA abundance (count:19)

SNP	Gene	Cis/trans	Tissue	Source
rs11683188	LIPT1	cis	lesional skin	skin_eQTL
rs11683188	LIPT1	Cis_1M	lymphoblastoid	RTeQTL
rs11683188	MITD1	Cis_1M	lymphoblastoid	RTeQTL
rs11683188	TSGA10	cis	Lymphoblastoid	GTEx
rs11683188	LIPT1	cis	parietal	SCAN
rs11683188	TSGA10	cis	cerebellum	SCAN
rs11683188	TSGA10	cis	Thyroid	GTEx
rs11683188	TSGA10	cis	Whole Blood	GTEx
rs11683188	LIPT1	cis	cerebellum	SCAN
rs11683188	LIPT1	cis	lymphoblastoid	seeQTL
rs11683188	TSGA10	cis	Skin Sun Exposed Lower leg	GTEx
rs11683188	TSGA10	cis	Esophagus Mucosa	GTEx
rs11683188	TSGA10	cis	lung	GTEx
rs11683188	TSGA10	Cis_1M	lymphoblastoid	RTeQTL
rs11683188	TSGA10	cis	multi-tissue	Pritchard
rs11683188	TSGA10	cis	lymphoblastoid	seeQTL
rs11683188	LIPT1	cis	uninvolved skin	skin_eQTL
rs11683188	TSGA10	cis	parietal	SCAN
rs11683188	ANKRD23	cis	parietal	SCAN

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:99718000-99740200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr2:99718200-99729400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr2:99718600-99739600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr2:99718800-99727200	Weak transcription	Primary T cells from cord blood	blood
5	chr2:99719800-99724600	Weak transcription	Primary T cells fromperipheralblood	blood
6	chr2:99723800-99739600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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