The 2.0 version of rSNPBase

Variant report

Variant rs11685425
Chromosome Location chr2:190612703-190612704
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190540800-190618400 Weak transcription Brain Cingulate Gyrus brain
2 chr2:190541600-190617000 Weak transcription Colon Smooth Muscle Colon
3 chr2:190550800-190617000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr2:190550800-190626800 Weak transcription Right Ventricle heart
5 chr2:190551200-190617000 Weak transcription HSMM muscle
6 chr2:190557400-190617000 Weak transcription Brain Angular Gyrus brain
7 chr2:190575000-190615800 Weak transcription Fetal Kidney kidney
8 chr2:190576800-190627000 Weak transcription Pancreas Pancrea
9 chr2:190577000-190622600 Weak transcription Aorta Aorta
10 chr2:190583000-190626800 Weak transcription Psoas Muscle Psoas
11 chr2:190589400-190626600 Weak transcription HUVEC blood vessel
12 chr2:190590800-190614800 Weak transcription Esophagus oesophagus
13 chr2:190591000-190612800 Weak transcription Rectal Smooth Muscle rectum
14 chr2:190594800-190627000 Weak transcription Gastric stomach
15 chr2:190597800-190626600 Weak transcription Fetal Heart heart
16 chr2:190599000-190626800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr2:190600800-190616600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr2:190601400-190626800 Weak transcription Placenta Amnion Placenta Amnion
19 chr2:190602400-190617000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr2:190602400-190626400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr2:190603800-190626800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr2:190605000-190626800 Weak transcription Fetal Brain Male brain
23 chr2:190606600-190613200 Strong transcription Rectal Mucosa Donor 29 rectum
24 chr2:190606800-190613200 Strong transcription Primary B cells from cord blood blood
25 chr2:190607000-190619200 Weak transcription NHDF-Ad bronchial
26 chr2:190607000-190626800 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr2:190607000-190626800 Weak transcription NH-A brain
28 chr2:190607400-190626800 Weak transcription HSMMtube muscle
29 chr2:190607800-190621000 Strong transcription Liver Liver
30 chr2:190607800-190622400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr2:190608000-190613400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr2:190608000-190613600 Strong transcription Primary T cells fromperipheralblood blood
33 chr2:190608200-190613400 Strong transcription Primary monocytes fromperipheralblood blood
34 chr2:190608400-190613000 Strong transcription Duodenum Smooth Muscle Duodenum
35 chr2:190608400-190613200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr2:190608400-190613200 Strong transcription Skeletal Muscle Female skeletal muscle
37 chr2:190608400-190613600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr2:190608400-190620200 Strong transcription Primary T helper cells fromperipheralblood blood
39 chr2:190608600-190614400 Strong transcription Primary T regulatory cells fromperipheralblood blood
40 chr2:190608600-190626200 Weak transcription Muscle Satellite Cultured Cells --
41 chr2:190608800-190614200 Strong transcription Primary B cells from peripheral blood blood
42 chr2:190609000-190612800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:190609000-190612800 Weak transcription Brain Hippocampus Middle brain
44 chr2:190609000-190613600 Strong transcription Adipose Nuclei Adipose
45 chr2:190609000-190614600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr2:190609200-190612800 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr2:190609200-190613800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr2:190609400-190617400 Weak transcription Brain Anterior Caudate brain
49 chr2:190609600-190613800 Strong transcription Dnd41 blood
50 chr2:190609600-190626600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015