The 2.0 version of rSNPBase

Variant report

Variant rs1233262
Chromosome Location chr2:190657833-190657834
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190649600-190658600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:190649800-190658600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:190649800-190662200 Weak transcription Aorta Aorta
4 chr2:190649800-190662200 Weak transcription Left Ventricle heart
5 chr2:190649800-190662800 Weak transcription Lung lung
6 chr2:190649800-190667200 Weak transcription Pancreas Pancrea
7 chr2:190649800-190675200 Weak transcription Esophagus oesophagus
8 chr2:190649800-190713400 Weak transcription Gastric stomach
9 chr2:190650000-190688200 Weak transcription Placenta Amnion Placenta Amnion
10 chr2:190650200-190658600 Weak transcription Ovary ovary
11 chr2:190650200-190662800 Weak transcription Psoas Muscle Psoas
12 chr2:190650200-190668200 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr2:190650200-190669200 Weak transcription Right Ventricle heart
14 chr2:190650200-190673000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr2:190650200-190673200 Weak transcription Small Intestine intestine
16 chr2:190650400-190659600 Weak transcription HSMMtube muscle
17 chr2:190650400-190662200 Weak transcription Brain Cingulate Gyrus brain
18 chr2:190650400-190662200 Weak transcription Brain Substantia Nigra brain
19 chr2:190650400-190662600 Weak transcription Brain Hippocampus Middle brain
20 chr2:190650400-190662800 Weak transcription Colon Smooth Muscle Colon
21 chr2:190650400-190664600 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr2:190650400-190666800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr2:190650400-190667400 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr2:190650400-190670400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr2:190650400-190675800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr2:190650400-190686800 Weak transcription Thymus Thymus
27 chr2:190650400-190688400 Weak transcription Colonic Mucosa Colon
28 chr2:190650400-190689800 Weak transcription Rectal Smooth Muscle rectum
29 chr2:190650400-190711400 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr2:190650600-190658400 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr2:190650600-190659600 Weak transcription Brain Inferior Temporal Lobe brain
32 chr2:190650600-190661400 Weak transcription K562 blood
33 chr2:190650600-190661800 Weak transcription NHEK skin
34 chr2:190650600-190664000 Weak transcription NHLF lung
35 chr2:190650600-190668200 Weak transcription Fetal Brain Female brain
36 chr2:190650600-190683200 Weak transcription Fetal Brain Male brain
37 chr2:190650600-190688800 Weak transcription Fetal Heart heart
38 chr2:190650600-190693200 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr2:190650600-190700400 Weak transcription Hela-S3 cervix
40 chr2:190650800-190658400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr2:190650800-190661200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr2:190650800-190675200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr2:190651000-190661000 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr2:190651000-190673000 Strong transcription HUES64 Cell Line embryonic stem cell
45 chr2:190651000-190673400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr2:190651200-190673800 Weak transcription Brain Germinal Matrix brain
47 chr2:190651400-190658600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr2:190653400-190673000 Strong transcription HUES48 Cell Line embryonic stem cell
49 chr2:190655000-190671800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr2:190655800-190661800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015