The 2.0 version of rSNPBase

Variant report

Variant rs11688806
Chromosome Location chr2:190344186-190344187
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190306800-190344200 Weak transcription Esophagus oesophagus
2 chr2:190315400-190347800 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr2:190333000-190347200 Weak transcription Small Intestine intestine
4 chr2:190333400-190344200 Weak transcription Stomach Mucosa stomach
5 chr2:190335000-190348600 Weak transcription Pancreas Pancrea
6 chr2:190335000-190348600 Weak transcription Right Ventricle heart
7 chr2:190335000-190348800 Weak transcription Gastric stomach
8 chr2:190335000-190351800 Weak transcription Psoas Muscle Psoas
9 chr2:190335000-190366200 Weak transcription Ovary ovary
10 chr2:190335800-190352600 Weak transcription Rectal Smooth Muscle rectum
11 chr2:190336600-190349600 Weak transcription HSMMtube muscle
12 chr2:190338400-190348600 Weak transcription Fetal Intestine Small intestine
13 chr2:190338600-190346000 Weak transcription Thymus Thymus
14 chr2:190338600-190348600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr2:190338600-190349600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr2:190339400-190344200 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr2:190339400-190349400 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr2:190339600-190344200 Weak transcription Brain Inferior Temporal Lobe brain
19 chr2:190339600-190344400 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr2:190339600-190348200 Weak transcription Lung lung
21 chr2:190339600-190348400 Weak transcription Spleen Spleen
22 chr2:190339600-190349800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr2:190339600-190350000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:190339600-190352600 Weak transcription Colon Smooth Muscle Colon
25 chr2:190340600-190348800 Weak transcription Stomach Smooth Muscle stomach
26 chr2:190340800-190352400 Weak transcription Placenta Amnion Placenta Amnion
27 chr2:190341200-190347000 Weak transcription Primary T cells fromperipheralblood blood
28 chr2:190341200-190347200 Weak transcription Adipose Nuclei Adipose
29 chr2:190341200-190348600 Weak transcription H1 Cell Line embryonic stem cell
30 chr2:190341200-190348600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr2:190341400-190344200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr2:190341400-190344400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:190341400-190348600 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr2:190341600-190348600 Weak transcription Fetal Intestine Large intestine
35 chr2:190341600-190348600 Weak transcription Left Ventricle heart
36 chr2:190341600-190350800 Weak transcription Liver Liver
37 chr2:190341800-190351000 Weak transcription HMEC breast
38 chr2:190341800-190351200 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr2:190342000-190344400 Weak transcription Muscle Satellite Cultured Cells --
40 chr2:190342200-190344600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:190342400-190344200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:190342400-190344800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr2:190342400-190357000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:190342600-190344200 Weak transcription Fetal Thymus thymus
45 chr2:190342600-190344400 Weak transcription GM12878-XiMat blood
46 chr2:190342600-190349000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr2:190342800-190344400 Weak transcription A549 lung
48 chr2:190342800-190350000 Weak transcription HSMM muscle
49 chr2:190343000-190346200 Weak transcription Placenta Placenta
50 chr2:190343000-190348200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015