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Variant report
Variant
rs11692051
Chromosome Location
chr2:37391460-37391461
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:4)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:4 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr2:37382848..37386165-chr2:37386168..37391618,9
MCF-7
breast:
2
chr2:37382496..37385502-chr2:37391173..37393698,3
K562
blood:
3
chr2:37390704..37393627-chr2:37422874..37425505,2
K562
blood:
4
chr2:37383207..37386416-chr2:37387973..37392066,4
MCF-7
breast:
No data
No data
No data
Variant related genes
Relation type
ENSG00000218739
Chromatin interaction
ENSG00000138068
Chromatin interaction
ENSG00000055332
Chromatin interaction
Extended variants information (count: 6 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:6)
rs_ID
r
2
[population]
rs11124563
0.84[ASN][1000 genomes]
rs11674946
0.88[ASN][1000 genomes]
rs11692043
0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55877960
0.82[ASN][1000 genomes]
rs62133149
0.81[ASN][1000 genomes]
rs62133150
0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links