Variant report

Variant	rs11703246
Chromosome Location	chr22:32181259-32181260
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	22:32170492-32188129..22:33178968-33185617	Hela-S3	cervix:
2	22:31936958-31958600..22:32170492-32188129	GM12878	blood:
3	22:32170492-32188129..22:32284948-32287956	Hela-S3	cervix:
4	22:32170492-32188129..22:32347255-32351014	K562	blood:
5	22:32170492-32188129..22:32846948-32860159	K562	blood:

Variant related genes	Relation type
ENSG00000184459	Chromatin interaction
ENSG00000214093	Chromatin interaction
ENSG00000229673	Chromatin interaction
ENSG00000227813	Chromatin interaction
ENSG00000238910	Chromatin interaction

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11705112	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12157989	0.80[AMR][1000 genomes]
rs131231	0.82[CHB][hapmap]
rs131254	0.81[YRI][hapmap]
rs5998069	0.82[CHB][hapmap]
rs5998074	0.82[CHB][hapmap]
rs5998115	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62238897	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32150800-32212800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr22:32151000-32210800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr22:32151400-32217400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr22:32152200-32184000	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr22:32152400-32187000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr22:32153000-32181600	Strong transcription	Primary monocytes fromperipheralblood	blood
7	chr22:32153400-32187000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr22:32153800-32183800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr22:32154000-32182000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
10	chr22:32154000-32188600	Strong transcription	Fetal Muscle Trunk	muscle
11	chr22:32154200-32184000	Strong transcription	Liver	Liver
12	chr22:32154400-32188200	Strong transcription	Primary neutrophils fromperipheralblood	blood
13	chr22:32156200-32182200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr22:32156400-32184000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr22:32159400-32184200	Strong transcription	Primary B cells from peripheral blood	blood
16	chr22:32159600-32186600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr22:32159600-32207600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr22:32163200-32185400	Weak transcription	Fetal Heart	heart
19	chr22:32164000-32182200	Strong transcription	Rectal Mucosa Donor 29	rectum
20	chr22:32164600-32196000	Weak transcription	Hela-S3	cervix
21	chr22:32165000-32197600	Weak transcription	Pancreatic Islets	Pancreatic Islet
22	chr22:32171200-32195000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr22:32171200-32204200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
24	chr22:32171600-32183000	Strong transcription	Duodenum Mucosa	Duodenum
25	chr22:32171600-32184600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr22:32171600-32185000	Weak transcription	K562	blood
27	chr22:32172000-32186000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr22:32172200-32182200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
29	chr22:32172200-32182200	Strong transcription	Primary T helper cells PMA-I stimulated	--
30	chr22:32172200-32182800	Strong transcription	Primary T cells fromperipheralblood	blood
31	chr22:32172200-32254400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr22:32172800-32221000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr22:32173400-32181600	Strong transcription	Fetal Intestine Large	intestine
34	chr22:32173400-32181800	Strong transcription	Primary T helper cells fromperipheralblood	blood
35	chr22:32173400-32181800	Strong transcription	Duodenum Smooth Muscle	Duodenum
36	chr22:32173600-32181400	Strong transcription	Primary B cells from cord blood	blood
37	chr22:32173800-32182000	Strong transcription	HUES48 Cell Line	embryonic stem cell
38	chr22:32173800-32182000	Strong transcription	Fetal Brain Female	brain
39	chr22:32175200-32182000	Weak transcription	Psoas Muscle	Psoas
40	chr22:32175200-32213800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
41	chr22:32175400-32193400	Weak transcription	HSMMtube	muscle
42	chr22:32175800-32202000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
43	chr22:32176000-32192400	Weak transcription	Fetal Kidney	kidney
44	chr22:32176000-32194600	Weak transcription	Fetal Brain Male	brain
45	chr22:32176000-32198600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
46	chr22:32176600-32193600	Weak transcription	H9 Cell Line	embryonic stem cell
47	chr22:32176800-32181400	Weak transcription	Brain Cingulate Gyrus	brain
48	chr22:32176800-32181600	Weak transcription	NHEK	skin
49	chr22:32176800-32193800	Weak transcription	HSMM	muscle
50	chr22:32176800-32196200	Weak transcription	NHLF	lung

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