The 2.0 version of rSNPBase

Variant report

Variant rs12157989
Chromosome Location chr22:32167271-32167272
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32150400-32174200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr22:32150600-32172600 Weak transcription Small Intestine intestine
3 chr22:32150800-32212800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr22:32151000-32174400 Weak transcription Psoas Muscle Psoas
5 chr22:32151000-32210800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr22:32151200-32174800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr22:32151200-32181000 Weak transcription NHDF-Ad bronchial
8 chr22:32151400-32217400 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr22:32151600-32170600 Weak transcription HUVEC blood vessel
10 chr22:32151600-32178200 Weak transcription Stomach Mucosa stomach
11 chr22:32151800-32173800 Weak transcription HepG2 liver
12 chr22:32152200-32184000 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr22:32152400-32167600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr22:32152400-32187000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr22:32153000-32181600 Strong transcription Primary monocytes fromperipheralblood blood
16 chr22:32153200-32168800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr22:32153400-32187000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr22:32153800-32183800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
19 chr22:32154000-32170800 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr22:32154000-32182000 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr22:32154000-32188600 Strong transcription Fetal Muscle Trunk muscle
22 chr22:32154200-32170000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr22:32154200-32170800 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr22:32154200-32171000 Strong transcription Primary T cells fromperipheralblood blood
25 chr22:32154200-32180600 Strong transcription Fetal Stomach stomach
26 chr22:32154200-32184000 Strong transcription Liver Liver
27 chr22:32154400-32188200 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr22:32156200-32170000 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr22:32156200-32182200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr22:32156400-32168600 Strong transcription Primary T helper cells PMA-I stimulated --
31 chr22:32156400-32184000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr22:32156800-32172400 Weak transcription Muscle Satellite Cultured Cells --
33 chr22:32158400-32172000 Weak transcription Fetal Brain Male brain
34 chr22:32159000-32177000 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr22:32159200-32168600 Strong transcription Brain Anterior Caudate brain
36 chr22:32159200-32169000 Strong transcription Duodenum Mucosa Duodenum
37 chr22:32159200-32171200 Strong transcription Placenta Placenta
38 chr22:32159200-32179600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr22:32159400-32184200 Strong transcription Primary B cells from peripheral blood blood
40 chr22:32159600-32186600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr22:32159600-32207600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr22:32160800-32168600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr22:32160800-32171000 Strong transcription Lung lung
44 chr22:32161000-32168400 Strong transcription Fetal Thymus thymus
45 chr22:32161400-32174400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr22:32162000-32167800 Weak transcription Aorta Aorta
47 chr22:32162000-32173800 Weak transcription H9 Cell Line embryonic stem cell
48 chr22:32162000-32173800 Weak transcription Esophagus oesophagus
49 chr22:32162000-32173800 Weak transcription Pancreas Pancrea
50 chr22:32162000-32174600 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015