The 2.0 version of rSNPBase

Variant report

Variant rs131246
Chromosome Location chr22:32128271-32128272
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32112200-32142000 Weak transcription Hela-S3 cervix
2 chr22:32112200-32145000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr22:32113200-32132600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr22:32113400-32130400 Weak transcription NH-A brain
5 chr22:32113400-32143800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr22:32113600-32134800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr22:32113600-32142000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr22:32114600-32129400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr22:32116000-32128400 Weak transcription Small Intestine intestine
10 chr22:32120000-32130200 Weak transcription HMEC breast
11 chr22:32120000-32132400 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr22:32120600-32134200 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr22:32120800-32134400 Weak transcription Colonic Mucosa Colon
14 chr22:32121000-32134000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr22:32121000-32144000 Weak transcription Fetal Kidney kidney
16 chr22:32121200-32128400 Weak transcription NHEK skin
17 chr22:32121200-32130400 Weak transcription NHDF-Ad bronchial
18 chr22:32121200-32143600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr22:32121200-32143600 Weak transcription Colon Smooth Muscle Colon
20 chr22:32121400-32129200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr22:32121400-32130400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr22:32121400-32130400 Weak transcription Thymus Thymus
23 chr22:32121400-32130400 Weak transcription NHLF lung
24 chr22:32121400-32130600 Weak transcription Aorta Aorta
25 chr22:32121400-32132400 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr22:32121400-32132400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr22:32121400-32133400 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr22:32121400-32134200 Weak transcription HUVEC blood vessel
29 chr22:32121400-32134400 Weak transcription H9 Cell Line embryonic stem cell
30 chr22:32121400-32134400 Weak transcription Esophagus oesophagus
31 chr22:32121400-32134400 Weak transcription Ovary ovary
32 chr22:32121400-32134400 Weak transcription A549 lung
33 chr22:32121400-32134600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr22:32121400-32143600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr22:32121600-32130200 Weak transcription Muscle Satellite Cultured Cells --
36 chr22:32121600-32130600 Weak transcription Fetal Thymus thymus
37 chr22:32121600-32134400 Weak transcription Fetal Brain Female brain
38 chr22:32121600-32144000 Weak transcription Brain Anterior Caudate brain
39 chr22:32121600-32144000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr22:32121600-32144400 Weak transcription HSMMtube muscle
41 chr22:32121600-32144600 Weak transcription Fetal Brain Male brain
42 chr22:32121800-32132400 Weak transcription Brain Germinal Matrix brain
43 chr22:32121800-32132400 Weak transcription Fetal Lung lung
44 chr22:32122000-32140600 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr22:32123000-32130400 Weak transcription HSMM muscle
46 chr22:32123000-32134200 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr22:32123200-32129400 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr22:32123200-32129800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr22:32123200-32130400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr22:32123200-32133800 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015