Variant report
| Variant | rs5998113 |
|---|---|
| Chromosome Location | chr22:32143243-32143244 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:32112200-32145000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 2 | chr22:32113400-32143800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 3 | chr22:32121000-32144000 | Weak transcription | Fetal Kidney | kidney |
| 4 | chr22:32121200-32143600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 5 | chr22:32121200-32143600 | Weak transcription | Colon Smooth Muscle | Colon |
| 6 | chr22:32121400-32143600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 7 | chr22:32121600-32144000 | Weak transcription | Brain Anterior Caudate | brain |
| 8 | chr22:32121600-32144000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 9 | chr22:32121600-32144400 | Weak transcription | HSMMtube | muscle |
| 10 | chr22:32121600-32144600 | Weak transcription | Fetal Brain Male | brain |
| 11 | chr22:32123200-32144600 | Weak transcription | Psoas Muscle | Psoas |
| 12 | chr22:32123200-32144800 | Weak transcription | Right Ventricle | heart |
| 13 | chr22:32124200-32144600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 14 | chr22:32124200-32144600 | Weak transcription | Spleen | Spleen |
| 15 | chr22:32125200-32143400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 16 | chr22:32125200-32143800 | Weak transcription | Brain Substantia Nigra | brain |
| 17 | chr22:32125200-32144600 | Weak transcription | Brain Angular Gyrus | brain |
| 18 | chr22:32128600-32143600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 19 | chr22:32128800-32144200 | Weak transcription | Small Intestine | intestine |
| 20 | chr22:32129200-32143800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 21 | chr22:32129200-32145200 | Weak transcription | Gastric | stomach |
| 22 | chr22:32130600-32143600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 23 | chr22:32130800-32145200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 24 | chr22:32131000-32143800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 25 | chr22:32131000-32144000 | Weak transcription | NHLF | lung |
| 26 | chr22:32131800-32143800 | Weak transcription | Fetal Heart | heart |
| 27 | chr22:32132400-32143800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 28 | chr22:32132400-32144000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 29 | chr22:32132600-32143800 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr22:32132800-32144800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 31 | chr22:32133000-32143600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 32 | chr22:32134600-32143400 | Weak transcription | NHDF-Ad | bronchial |
| 33 | chr22:32134800-32143800 | Weak transcription | Fetal Lung | lung |
| 34 | chr22:32134800-32144200 | Weak transcription | Colonic Mucosa | Colon |
| 35 | chr22:32134800-32144200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 36 | chr22:32134800-32144600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr22:32134800-32144600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 38 | chr22:32134800-32144600 | Weak transcription | Ovary | ovary |
| 39 | chr22:32134800-32144600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 40 | chr22:32134800-32144800 | Weak transcription | Right Atrium | heart |
| 41 | chr22:32134800-32145200 | Weak transcription | Esophagus | oesophagus |
| 42 | chr22:32134800-32145200 | Weak transcription | Left Ventricle | heart |
| 43 | chr22:32134800-32145200 | Weak transcription | Lung | lung |
| 44 | chr22:32135000-32143600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 45 | chr22:32135000-32143600 | Weak transcription | Brain Hippocampus Middle | brain |
| 46 | chr22:32135400-32144000 | Weak transcription | A549 | lung |
| 47 | chr22:32135600-32144000 | Weak transcription | Brain Germinal Matrix | brain |
| 48 | chr22:32135800-32143400 | Strong transcription | Fetal Intestine Small | intestine |
| 49 | chr22:32135800-32143400 | Weak transcription | NH-A | brain |
| 50 | chr22:32135800-32143400 | Weak transcription | NHEK | skin |
