Variant report

Variant	rs62239186
Chromosome Location	chr22:32071017-32071018
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 82 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:82)

rs_ID	r²[population]
rs1013703	0.80[ASN][1000 genomes]
rs1076674	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11703079	0.85[AMR][1000 genomes]
rs11703102	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11703798	0.85[AMR][1000 genomes]
rs11704362	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs11705329	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs12157427	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12158002	0.85[AMR][1000 genomes]
rs12160120	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12160737	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12166848	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs131222	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs131224	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs131226	0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs131228	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs131235	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs131237	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs131241	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs131243	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs131246	0.80[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs131251	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs131252	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs131254	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs140079	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs140083	0.84[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs140085	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs16989374	0.85[AMR][1000 genomes]
rs2413058	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs28374732	0.87[AMR][1000 genomes]
rs3804088	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4603881	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs56406828	0.85[AMR][1000 genomes]
rs5753753	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5994417	0.85[AMR][1000 genomes]
rs5994424	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs5998063	0.81[AMR][1000 genomes]
rs5998064	0.85[AMR][1000 genomes]
rs5998065	0.84[AMR][1000 genomes]
rs5998066	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs5998068	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs5998070	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs5998071	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs5998079	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5998080	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5998081	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5998082	0.92[AMR][1000 genomes]
rs5998084	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5998085	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs5998089	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5998091	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5998093	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs5998095	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs5998098	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs5998099	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs5998103	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs5998113	0.80[ASN][1000 genomes]
rs5998114	0.80[ASN][1000 genomes]
rs5998116	0.80[ASN][1000 genomes]
rs60209974	0.94[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs60669705	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61273982	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs62239167	0.88[AMR][1000 genomes]
rs62239185	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62239187	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62239188	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62240515	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs62240684	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62240686	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62240687	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7289259	0.80[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs73162139	0.80[ASN][1000 genomes]
rs740227	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8136047	0.96[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs8141719	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8143084	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs81946	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9619221	0.84[AMR][1000 genomes]
rs9619222	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9619224	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9621307	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9621316	0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32058800-32072400	Weak transcription	Fetal Heart	heart
2	chr22:32059000-32072400	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr22:32059000-32072400	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr22:32067000-32072400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr22:32067000-32072600	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr22:32067400-32078800	Weak transcription	HepG2	liver
7	chr22:32067600-32072400	Weak transcription	Placenta	Placenta
8	chr22:32067800-32072400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr22:32068400-32080400	Weak transcription	Hela-S3	cervix
10	chr22:32069200-32071200	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr22:32070800-32072200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr22:32070800-32072400	Weak transcription	Primary B cells from cord blood	blood
13	chr22:32071000-32072200	Weak transcription	Primary B cells from peripheral blood	blood
14	chr22:32071000-32072200	Weak transcription	GM12878-XiMat	blood
15	chr22:32071000-32072200	Weak transcription	Monocytes-CD14+_RO01746	blood

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