The 2.0 version of rSNPBase

Variant report

Variant rs62238904
Chromosome Location chr22:32187380-32187381
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32150800-32212800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:32151000-32210800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr22:32151400-32217400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr22:32154000-32188600 Strong transcription Fetal Muscle Trunk muscle
5 chr22:32154400-32188200 Strong transcription Primary neutrophils fromperipheralblood blood
6 chr22:32159600-32207600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr22:32164600-32196000 Weak transcription Hela-S3 cervix
8 chr22:32165000-32197600 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr22:32171200-32195000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr22:32171200-32204200 Strong transcription Primary hematopoietic stem cells short term culture blood
11 chr22:32172200-32254400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr22:32172800-32221000 Strong transcription Fetal Adrenal Gland Adrenal Gland
13 chr22:32175200-32213800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr22:32175400-32193400 Weak transcription HSMMtube muscle
15 chr22:32175800-32202000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr22:32176000-32192400 Weak transcription Fetal Kidney kidney
17 chr22:32176000-32194600 Weak transcription Fetal Brain Male brain
18 chr22:32176000-32198600 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr22:32176600-32193600 Weak transcription H9 Cell Line embryonic stem cell
20 chr22:32176800-32193800 Weak transcription HSMM muscle
21 chr22:32176800-32196200 Weak transcription NHLF lung
22 chr22:32176800-32198800 Weak transcription A549 lung
23 chr22:32176800-32200000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr22:32177000-32190600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr22:32177000-32193200 Weak transcription Esophagus oesophagus
26 chr22:32177000-32193200 Weak transcription Right Ventricle heart
27 chr22:32177000-32193600 Weak transcription Pancreas Pancrea
28 chr22:32177000-32194600 Weak transcription Colonic Mucosa Colon
29 chr22:32178200-32199600 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr22:32178800-32189800 Weak transcription HUVEC blood vessel
31 chr22:32178800-32193000 Weak transcription Colon Smooth Muscle Colon
32 chr22:32179200-32193600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr22:32179400-32190600 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr22:32179400-32193400 Weak transcription Gastric stomach
35 chr22:32179400-32193600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr22:32179400-32193600 Weak transcription Rectal Smooth Muscle rectum
37 chr22:32179600-32193200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr22:32179600-32193200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr22:32179600-32193200 Weak transcription Lung lung
40 chr22:32179600-32193200 Weak transcription Thymus Thymus
41 chr22:32179600-32193200 Weak transcription Spleen Spleen
42 chr22:32179600-32193400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr22:32179600-32193400 Weak transcription Small Intestine intestine
44 chr22:32179600-32193600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr22:32179600-32193600 Weak transcription Aorta Aorta
46 chr22:32179600-32193800 Weak transcription Placenta Amnion Placenta Amnion
47 chr22:32179800-32189600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr22:32180000-32193200 Weak transcription Muscle Satellite Cultured Cells --
49 chr22:32180000-32198600 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr22:32180200-32193200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015