Variant report

Variant rs11706886
Chromosome Location chr3:105466055-105466056
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105389200-105467200 Weak transcription Stomach Mucosa stomach
2 chr3:105439000-105466200 Weak transcription H9 Cell Line embryonic stem cell
3 chr3:105439000-105466600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr3:105439000-105471200 Weak transcription Fetal Thymus thymus
5 chr3:105439000-105471400 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr3:105439000-105471400 Weak transcription HMEC breast
7 chr3:105439000-105471600 Weak transcription Fetal Brain Male brain
8 chr3:105439000-105475800 Weak transcription Esophagus oesophagus
9 chr3:105439000-105477400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr3:105439000-105477400 Weak transcription Lung lung
11 chr3:105439000-105477400 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr3:105439200-105477200 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr3:105446600-105477600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr3:105452400-105477400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr3:105452800-105477400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr3:105458000-105475600 Weak transcription Pancreas Pancrea
17 chr3:105460200-105471600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr3:105462000-105470200 Weak transcription Dnd41 blood
19 chr3:105463200-105471400 Enhancers Primary T helper cells fromperipheralblood blood
20 chr3:105463400-105470800 Weak transcription Brain Inferior Temporal Lobe brain
21 chr3:105464200-105471000 Enhancers Primary T cells from cord blood blood
22 chr3:105464200-105477400 Weak transcription Fetal Muscle Trunk muscle
23 chr3:105464200-105478200 Weak transcription Right Atrium heart
24 chr3:105464400-105466400 Enhancers NHEK skin
25 chr3:105464400-105477400 Weak transcription Fetal Lung lung
26 chr3:105464600-105466400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr3:105464600-105466400 Enhancers Fetal Intestine Small intestine
28 chr3:105464600-105466600 Enhancers Primary hematopoietic stem cells blood
29 chr3:105464600-105467600 Enhancers Brain Hippocampus Middle brain
30 chr3:105464600-105471200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr3:105464600-105477400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr3:105464800-105469400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr3:105464800-105477400 Weak transcription Liver Liver
34 chr3:105464800-105477400 Weak transcription Stomach Smooth Muscle stomach
35 chr3:105464800-105482600 Weak transcription Placenta Amnion Placenta Amnion
36 chr3:105465000-105466400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr3:105465000-105467800 Enhancers Adipose Nuclei Adipose
38 chr3:105465000-105471200 Weak transcription HSMMtube muscle
39 chr3:105465000-105472000 Weak transcription HUVEC blood vessel
40 chr3:105465200-105466200 Enhancers iPS-20b Cell Line embryonic stem cell
41 chr3:105465200-105466200 Enhancers Primary B cells from peripheral blood blood
42 chr3:105465200-105466200 Enhancers Primary mononuclear cells fromperipheralblood Blood
43 chr3:105465200-105466200 Enhancers Duodenum Mucosa Duodenum
44 chr3:105465200-105466600 Enhancers HepG2 liver
45 chr3:105465200-105467000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr3:105465200-105467400 Enhancers HUES48 Cell Line embryonic stem cell
47 chr3:105465200-105467800 Enhancers iPS-18 Cell Line embryonic stem cell
48 chr3:105465200-105469600 Weak transcription Placenta Placenta
49 chr3:105465200-105471200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
50 chr3:105465400-105466400 Enhancers ES-I3 Cell Line embryonic stem cell

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