Variant report

Variant rs2301029
Chromosome Location chr3:105469130-105469131
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105439000-105471200 Weak transcription Fetal Thymus thymus
2 chr3:105439000-105471400 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr3:105439000-105471400 Weak transcription HMEC breast
4 chr3:105439000-105471600 Weak transcription Fetal Brain Male brain
5 chr3:105439000-105475800 Weak transcription Esophagus oesophagus
6 chr3:105439000-105477400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr3:105439000-105477400 Weak transcription Lung lung
8 chr3:105439000-105477400 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr3:105439200-105477200 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr3:105446600-105477600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr3:105452400-105477400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:105452800-105477400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr3:105458000-105475600 Weak transcription Pancreas Pancrea
14 chr3:105460200-105471600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr3:105462000-105470200 Weak transcription Dnd41 blood
16 chr3:105463200-105471400 Enhancers Primary T helper cells fromperipheralblood blood
17 chr3:105463400-105470800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr3:105464200-105471000 Enhancers Primary T cells from cord blood blood
19 chr3:105464200-105477400 Weak transcription Fetal Muscle Trunk muscle
20 chr3:105464200-105478200 Weak transcription Right Atrium heart
21 chr3:105464400-105477400 Weak transcription Fetal Lung lung
22 chr3:105464600-105471200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr3:105464600-105477400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr3:105464800-105469400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr3:105464800-105477400 Weak transcription Liver Liver
26 chr3:105464800-105477400 Weak transcription Stomach Smooth Muscle stomach
27 chr3:105464800-105482600 Weak transcription Placenta Amnion Placenta Amnion
28 chr3:105465000-105471200 Weak transcription HSMMtube muscle
29 chr3:105465000-105472000 Weak transcription HUVEC blood vessel
30 chr3:105465200-105469600 Weak transcription Placenta Placenta
31 chr3:105465200-105471200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
32 chr3:105465400-105471200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr3:105465600-105471200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr3:105465600-105471400 Enhancers Primary T helper naive cells fromperipheralblood blood
35 chr3:105465600-105478200 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr3:105465800-105469200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr3:105465800-105469400 Weak transcription GM12878-XiMat blood
38 chr3:105465800-105469600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr3:105465800-105470000 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr3:105465800-105471200 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr3:105465800-105471200 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr3:105465800-105471400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr3:105465800-105471400 Weak transcription HSMM muscle
44 chr3:105465800-105471600 Weak transcription Gastric stomach
45 chr3:105465800-105477200 Weak transcription Fetal Stomach stomach
46 chr3:105465800-105477400 Weak transcription Fetal Intestine Large intestine
47 chr3:105465800-105477400 Weak transcription Fetal Muscle Leg muscle
48 chr3:105465800-105477400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr3:105465800-105483400 Weak transcription Rectal Smooth Muscle rectum
50 chr3:105466000-105470800 Enhancers Primary T helper naive cells from peripheral blood blood

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