The 2.0 version of rSNPBase

Variant report

Variant rs11724538
Chromosome Location chr4:47450932-47450933
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:47436800-47465000 Weak transcription Gastric stomach
2 chr4:47438600-47464200 Weak transcription Small Intestine intestine
3 chr4:47441000-47456000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr4:47442200-47464000 Weak transcription Left Ventricle heart
5 chr4:47442800-47451800 Weak transcription Muscle Satellite Cultured Cells --
6 chr4:47443600-47464000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr4:47444000-47453600 Weak transcription HSMMtube muscle
8 chr4:47445000-47454800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr4:47445200-47453600 Weak transcription NHDF-Ad bronchial
10 chr4:47445200-47454600 Weak transcription Fetal Intestine Small intestine
11 chr4:47445400-47451400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr4:47445400-47453600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr4:47445400-47465000 Weak transcription Lung lung
14 chr4:47445600-47451000 Weak transcription Primary T cells from cord blood blood
15 chr4:47445600-47452000 Weak transcription Stomach Smooth Muscle stomach
16 chr4:47445600-47453400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr4:47445600-47453600 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr4:47445600-47454600 Weak transcription Ovary ovary
19 chr4:47445600-47464000 Weak transcription Pancreas Pancrea
20 chr4:47445600-47464200 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr4:47445600-47464200 Weak transcription Thymus Thymus
22 chr4:47445800-47465000 Weak transcription Aorta Aorta
23 chr4:47446000-47465000 Weak transcription Esophagus oesophagus
24 chr4:47446200-47451800 Weak transcription Dnd41 blood
25 chr4:47446200-47452000 Weak transcription Primary B cells from peripheral blood blood
26 chr4:47446200-47453600 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr4:47446200-47453600 Weak transcription GM12878-XiMat blood
28 chr4:47446600-47463000 Weak transcription Brain Anterior Caudate brain
29 chr4:47446800-47452000 Weak transcription Primary hematopoietic stem cells blood
30 chr4:47447000-47453400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr4:47447000-47453600 Weak transcription Fetal Thymus thymus
32 chr4:47447000-47461400 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr4:47447200-47451800 Weak transcription Primary monocytes fromperipheralblood blood
34 chr4:47447200-47451800 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr4:47447200-47452000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr4:47447200-47453600 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr4:47447200-47453800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr4:47447600-47452000 Weak transcription Primary B cells from cord blood blood
39 chr4:47448000-47452000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr4:47449000-47452400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr4:47449200-47452200 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr4:47449200-47455000 Weak transcription Fetal Brain Female brain
43 chr4:47449600-47451400 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr4:47449600-47451400 Weak transcription Osteobl bone
45 chr4:47449600-47452000 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr4:47449600-47464200 Weak transcription Fetal Brain Male brain
47 chr4:47449800-47452200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr4:47449800-47452600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr4:47449800-47465000 Weak transcription Placenta Amnion Placenta Amnion
50 chr4:47450000-47451800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015