Variant report

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10021133	0.80[CEU][hapmap]
rs10938860	0.80[CEU][hapmap]
rs11725029	0.82[CEU][hapmap]
rs11731835	0.82[CEU][hapmap]
rs11734604	0.90[CEU][hapmap]
rs11737531	0.82[CEU][hapmap]
rs11932037	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11944162	0.90[CEU][hapmap]
rs12503772	0.80[CEU][hapmap]
rs13105154	0.82[CEU][hapmap]
rs13112610	0.82[CEU][hapmap]
rs13115987	0.82[CEU][hapmap]
rs13147352	0.82[CEU][hapmap]
rs1380271	0.80[CEU][hapmap]
rs1380272	0.80[CEU][hapmap]
rs1459280	0.80[CEU][hapmap]
rs17496681	0.80[CEU][hapmap]
rs17496959	0.82[CEU][hapmap]
rs17497844	0.80[CEU][hapmap]
rs17497900	0.82[CEU][hapmap]
rs17498614	0.82[CEU][hapmap]
rs17561951	0.82[CEU][hapmap]
rs17563824	0.82[CEU][hapmap]
rs17564865	0.82[CEU][hapmap]
rs1847426	0.82[CEU][hapmap]
rs1847427	0.81[CEU][hapmap]
rs184860	0.82[CEU][hapmap]
rs2044809	0.90[CEU][hapmap]
rs2137650	0.80[CEU][hapmap]
rs2323111	0.81[EUR][1000 genomes]
rs2323128	0.82[CEU][hapmap]
rs360697	0.80[CEU][hapmap]
rs4697243	0.82[CEU][hapmap]
rs6448076	0.82[CEU][hapmap]
rs6448096	0.82[CEU][hapmap]
rs6834778	0.82[CEU][hapmap]
rs7674954	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7684151	0.80[CEU][hapmap]
rs7696044	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817467	chr4:21602921-22422816	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv878751	chr4:21712050-21793807	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv4269	chr4:21761429-21806056	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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