Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:21793571..21796261-chr4:21796696..21799237,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10021133	0.80[CEU][hapmap]
rs10938860	0.80[CEU][hapmap]
rs11725029	0.80[CEU][hapmap]
rs11731835	0.80[CEU][hapmap]
rs11732993	1.00[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap]
rs11734604	0.90[CEU][hapmap];0.92[MEX][hapmap]
rs11737531	0.80[CEU][hapmap]
rs11932037	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11944162	0.90[CEU][hapmap];0.92[MEX][hapmap]
rs12503772	0.80[CEU][hapmap]
rs12509804	0.94[ASW][hapmap];0.90[YRI][hapmap];0.84[AFR][1000 genomes]
rs13105154	0.80[CEU][hapmap]
rs13112610	0.80[CEU][hapmap]
rs13115987	0.80[CEU][hapmap]
rs13147352	0.80[CEU][hapmap]
rs1380271	0.80[CEU][hapmap]
rs1380272	0.80[CEU][hapmap]
rs1459280	0.80[CEU][hapmap]
rs17496681	0.80[CEU][hapmap]
rs17496959	0.80[CEU][hapmap]
rs17497900	0.80[CEU][hapmap]
rs17498614	0.80[CEU][hapmap]
rs17561951	0.80[CEU][hapmap]
rs17563824	0.80[CEU][hapmap]
rs17564865	0.80[CEU][hapmap]
rs1847426	0.80[CEU][hapmap]
rs184860	0.80[CEU][hapmap]
rs2044809	0.90[CEU][hapmap];0.92[MEX][hapmap]
rs2137650	0.80[CEU][hapmap]
rs2323111	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2323128	0.80[CEU][hapmap]
rs4260532	0.90[YRI][hapmap];0.84[AFR][1000 genomes]
rs4328900	0.84[AFR][1000 genomes]
rs4697243	0.80[CEU][hapmap]
rs6448076	0.80[CEU][hapmap]
rs6448096	0.80[CEU][hapmap]
rs6834778	0.80[CEU][hapmap]
rs7674954	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7684151	0.80[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817467	chr4:21602921-22422816	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv4269	chr4:21761429-21806056	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv1005221	chr4:21786702-21822000	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:21794600-21803000	Weak transcription	Muscle Satellite Cultured Cells	--

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