Variant report
| Variant | rs11748974 |
|---|---|
| Chromosome Location | chr5:68594539-68594540 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:68531400-68605000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr5:68541200-68620400 | Weak transcription | Stomach Mucosa | stomach |
| 3 | chr5:68554200-68604400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 4 | chr5:68564200-68611200 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr5:68565600-68627400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 6 | chr5:68566800-68610800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 7 | chr5:68575600-68605000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 8 | chr5:68575600-68608200 | Weak transcription | Right Ventricle | heart |
| 9 | chr5:68576000-68605200 | Weak transcription | Left Ventricle | heart |
| 10 | chr5:68576200-68605200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 11 | chr5:68576200-68609400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 12 | chr5:68576400-68614400 | Weak transcription | Colon Smooth Muscle | Colon |
| 13 | chr5:68576400-68627600 | Weak transcription | Brain Substantia Nigra | brain |
| 14 | chr5:68576400-68627800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 15 | chr5:68576600-68595400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 16 | chr5:68576600-68627800 | Weak transcription | Brain Angular Gyrus | brain |
| 17 | chr5:68577200-68601400 | Weak transcription | Aorta | Aorta |
| 18 | chr5:68577400-68605200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 19 | chr5:68577400-68607800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 20 | chr5:68577400-68628200 | Weak transcription | Small Intestine | intestine |
| 21 | chr5:68577600-68619800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 22 | chr5:68577600-68627400 | Weak transcription | NHEK | skin |
| 23 | chr5:68577800-68626600 | Weak transcription | A549 | lung |
| 24 | chr5:68579000-68603600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 25 | chr5:68581600-68601200 | Weak transcription | Fetal Thymus | thymus |
| 26 | chr5:68581600-68627600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 27 | chr5:68581800-68605200 | Weak transcription | GM12878-XiMat | blood |
| 28 | chr5:68581800-68608200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 29 | chr5:68581800-68609000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 30 | chr5:68581800-68609200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 31 | chr5:68581800-68611000 | Weak transcription | Psoas Muscle | Psoas |
| 32 | chr5:68581800-68617800 | Weak transcription | Brain Hippocampus Middle | brain |
| 33 | chr5:68581800-68626800 | Weak transcription | Fetal Brain Female | brain |
| 34 | chr5:68581800-68627600 | Weak transcription | Brain Anterior Caudate | brain |
| 35 | chr5:68582000-68601600 | Weak transcription | Fetal Muscle Leg | muscle |
| 36 | chr5:68582800-68622400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 37 | chr5:68585000-68609000 | Weak transcription | Spleen | Spleen |
| 38 | chr5:68587200-68602400 | Strong transcription | Fetal Intestine Small | intestine |
| 39 | chr5:68587600-68597800 | Strong transcription | Liver | Liver |
| 40 | chr5:68587800-68597800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 41 | chr5:68588400-68595600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 42 | chr5:68588600-68595600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 43 | chr5:68588600-68615800 | Weak transcription | Colonic Mucosa | Colon |
| 44 | chr5:68588800-68605000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 45 | chr5:68589200-68605000 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 46 | chr5:68590800-68605200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 47 | chr5:68591000-68595400 | Weak transcription | Primary B cells from peripheral blood | blood |
| 48 | chr5:68591200-68595600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 49 | chr5:68591200-68606200 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 50 | chr5:68591400-68600600 | Weak transcription | Dnd41 | blood |
