Variant report

Variant rs2932770
Chromosome Location chr5:68513290-68513291
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:68486000-68513600 Weak transcription Gastric stomach
2 chr5:68495400-68513400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr5:68495600-68513400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr5:68502800-68513600 Weak transcription Small Intestine intestine
5 chr5:68507000-68513400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr5:68507400-68513400 Weak transcription H9 Cell Line embryonic stem cell
7 chr5:68508000-68513400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr5:68508000-68513400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr5:68509600-68513600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr5:68509800-68513400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr5:68512400-68514600 Active TSS Rectal Mucosa Donor 29 rectum
12 chr5:68512400-68514800 Active TSS K562 blood
13 chr5:68512400-68515200 Active TSS A549 lung
14 chr5:68512400-68515200 Active TSS Hela-S3 cervix
15 chr5:68512600-68513400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr5:68512600-68514400 Active TSS Duodenum Mucosa Duodenum
17 chr5:68512600-68514600 Active TSS GM12878-XiMat blood
18 chr5:68512600-68514800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr5:68512800-68513400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr5:68512800-68514400 Active TSS Breast Myoepithelial Primary Cells Breast
21 chr5:68512800-68514400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
22 chr5:68512800-68514400 Active TSS Placenta Placenta
23 chr5:68512800-68514600 Active TSS Primary hematopoietic stem cells short term culture blood
24 chr5:68512800-68514600 Active TSS Duodenum Smooth Muscle Duodenum
25 chr5:68512800-68514600 Active TSS Rectal Mucosa Donor 31 rectum
26 chr5:68512800-68514600 Active TSS Rectal Smooth Muscle rectum
27 chr5:68512800-68514800 Active TSS Colonic Mucosa Colon
28 chr5:68512800-68515200 Active TSS ES-I3 Cell Line embryonic stem cell
29 chr5:68513000-68513400 Enhancers Primary neutrophils fromperipheralblood blood
30 chr5:68513000-68513400 Flanking Active TSS Primary B cells from cord blood blood
31 chr5:68513000-68513400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
32 chr5:68513000-68513400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
33 chr5:68513000-68513400 Flanking Active TSS Muscle Satellite Cultured Cells --
34 chr5:68513000-68513400 Flanking Active TSS Adipose Nuclei Adipose
35 chr5:68513000-68513400 Flanking Active TSS HepG2 liver
36 chr5:68513000-68513400 Flanking Active TSS HMEC breast
37 chr5:68513000-68513400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
38 chr5:68513000-68513400 Flanking Active TSS NHEK skin
39 chr5:68513000-68513600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr5:68513000-68513600 Active TSS Brain Germinal Matrix brain
41 chr5:68513000-68513600 Active TSS Right Atrium heart
42 chr5:68513000-68513600 Active TSS Skeletal Muscle Female skeletal muscle
43 chr5:68513000-68514200 Active TSS Primary T cells fromperipheralblood blood
44 chr5:68513000-68514200 Active TSS Primary T helper cells PMA-I stimulated --
45 chr5:68513000-68514200 Active TSS Fetal Brain Male brain
46 chr5:68513000-68514400 Active TSS Primary T helper naive cells from peripheral blood blood
47 chr5:68513000-68514400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr5:68513000-68514400 Active TSS Aorta Aorta
49 chr5:68513000-68514400 Active TSS Liver Liver
50 chr5:68513000-68514400 Active TSS Fetal Lung lung

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