Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1005126	0.92[CHB][hapmap]
rs1029328	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs10807030	0.96[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs10807031	0.96[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs11751928	0.92[CHB][hapmap]
rs13190937	0.91[CHB][hapmap]
rs13196606	0.91[CHB][hapmap]
rs13199081	0.92[CHB][hapmap]
rs13215804	0.91[CHB][hapmap];0.83[ASN][1000 genomes]
rs16894011	1.00[CHB][hapmap]
rs16894128	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17856167	1.00[CHB][hapmap]
rs2108923	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs213239	0.82[CHB][hapmap]
rs213241	0.81[CHB][hapmap]
rs213243	0.82[CHB][hapmap]
rs213244	0.81[CHB][hapmap]
rs2232427	1.00[CHB][hapmap]
rs34302671	0.87[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs35908902	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3799499	0.90[CHB][hapmap]
rs3799500	0.92[CHB][hapmap]
rs61535158	0.82[ASN][1000 genomes]
rs6902687	0.91[CHB][hapmap]
rs6905380	0.92[CHB][hapmap]
rs7754960	0.92[CHB][hapmap]
rs7774981	0.91[CHB][hapmap]
rs9468345	0.82[CHB][hapmap]
rs9468358	0.92[CHB][hapmap]
rs9468364	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv969368	chr6:28415575-28416789	Active TSS Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28415600-28416400	Weak transcription	Primary T killer memory cells from peripheral blood	blood

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