Variant report
Variant | rs11760273 |
---|---|
Chromosome Location | chr7:122274313-122274314 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:122265961..122267873-chr7:122272668..122274535,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1010496 | 1.00[ASN][1000 genomes] |
rs10239784 | 1.00[ASN][1000 genomes] |
rs10487229 | 1.00[ASN][1000 genomes] |
rs11760538 | 1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11760643 | 0.88[EUR][1000 genomes] |
rs11760765 | 1.00[ASN][1000 genomes] |
rs11761460 | 0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11763626 | 1.00[AFR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11764665 | 1.00[ASN][1000 genomes] |
rs11765061 | 1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11766231 | 0.88[EUR][1000 genomes] |
rs11767257 | 1.00[ASN][1000 genomes] |
rs11767400 | 1.00[ASN][1000 genomes] |
rs11768209 | 0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11769723 | 1.00[ASN][1000 genomes] |
rs11770993 | 1.00[ASN][1000 genomes] |
rs12154838 | 1.00[AFR][1000 genomes] |
rs17381305 | 1.00[ASN][1000 genomes] |
rs17381596 | 1.00[ASN][1000 genomes] |
rs17381814 | 1.00[ASN][1000 genomes] |
rs17381835 | 1.00[ASN][1000 genomes] |
rs17465937 | 1.00[ASN][1000 genomes] |
rs34393979 | 1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs41281719 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55833580 | 0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6466821 | 1.00[ASN][1000 genomes] |
rs7778395 | 0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7779199 | 0.95[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7790115 | 1.00[ASN][1000 genomes] |
rs7804719 | 1.00[ASN][1000 genomes] |
rs995251 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1017029 | chr7:121958574-122338623 | Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
2 | nsv532178 | chr7:122203056-122978846 | Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
3 | nsv532179 | chr7:122249639-122986259 | Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:122269800-122288000 | Weak transcription | HepG2 | liver |