Variant report

Variant	rs11766415
Chromosome Location	chr7:106708765-106708766
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SPI1	chr7:106708637-106708917	GM12891	blood:	n/a	n/a
2	POLR2A	chr7:106708637-106708965	SK-N-SH	brain:	n/a	n/a
3	GATA3	chr7:106708495-106709179	SK-N-SH	brain:	n/a	n/a
4	SPI1	chr7:106708677-106708908	GM12878	blood:	n/a	n/a
5	GATA3	chr7:106708464-106709481	SK-N-SH	brain:	n/a	n/a
6	ZNF384	chr7:106708696-106708874	K562	blood:	n/a	n/a
7	TEAD4	chr7:106708470-106709050	SK-N-SH	brain:	n/a	n/a
8	FOXP2	chr7:106708693-106708913	SK-N-MC	brain:	n/a	n/a

Variant related genes	Relation type
PRKAR2B	TF binding region

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs13243645	0.86[ASN][1000 genomes]
rs2237648	0.88[JPT][hapmap];0.89[ASN][1000 genomes]
rs3801969	0.83[CEU][hapmap]
rs6946733	0.88[JPT][hapmap];0.86[ASN][1000 genomes]
rs6975038	0.86[ASN][1000 genomes]
rs758943	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831087	chr7:106673465-106872460	Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106701000-106710000	Weak transcription	Right Ventricle	heart
2	chr7:106701600-106716000	Weak transcription	HUVEC	blood vessel
3	chr7:106703800-106711400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr7:106704600-106708800	Weak transcription	Fetal Kidney	kidney
5	chr7:106706400-106709400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr7:106706400-106709800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr7:106706400-106710000	Weak transcription	Left Ventricle	heart
8	chr7:106706400-106710000	Weak transcription	Pancreas	Pancrea
9	chr7:106706400-106711800	Weak transcription	Brain Anterior Caudate	brain
10	chr7:106706400-106718600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr7:106706400-106720000	Weak transcription	Spleen	Spleen
12	chr7:106706600-106708800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr7:106706600-106710000	Weak transcription	Fetal Heart	heart
14	chr7:106706800-106719200	Weak transcription	Fetal Brain Male	brain
15	chr7:106707200-106708800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr7:106707400-106709000	Enhancers	H1 Cell Line	embryonic stem cell
17	chr7:106707400-106710000	Enhancers	K562	blood
18	chr7:106707600-106709000	Enhancers	H9 Cell Line	embryonic stem cell
19	chr7:106707600-106709400	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr7:106707800-106709200	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chr7:106707800-106709400	Enhancers	HUES64 Cell Line	embryonic stem cell
22	chr7:106708000-106709200	Enhancers	iPS-18 Cell Line	embryonic stem cell
23	chr7:106708000-106710200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr7:106708200-106708800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
25	chr7:106708200-106709000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr7:106708200-106709200	Enhancers	HUES6 Cell Line	embryonic stem cell
27	chr7:106708200-106709400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr7:106708400-106709000	Enhancers	NHLF	lung
29	chr7:106708600-106708800	Enhancers	ES-I3 Cell Line	embryonic stem cell
30	chr7:106708600-106708800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr7:106708600-106708800	Active TSS	Right Atrium	heart
32	chr7:106708600-106709000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr7:106708600-106709000	Flanking Active TSS	Adipose Nuclei	Adipose
34	chr7:106708600-106709000	Enhancers	Ovary	ovary
35	chr7:106708600-106709000	Enhancers	Monocytes-CD14+_RO01746	blood
36	chr7:106708600-106709400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr7:106708600-106709400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr7:106708600-106709400	Enhancers	Duodenum Smooth Muscle	Duodenum
39	chr7:106708600-106709800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
40	chr7:106708600-106710000	Enhancers	HUES48 Cell Line	embryonic stem cell

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