Variant report

Variant	rs6946733
Chromosome Location	chr7:106670288-106670289
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10227616	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11766415	0.88[JPT][hapmap];0.86[ASN][1000 genomes]
rs12671537	1.00[LWK][hapmap];0.83[TSI][hapmap]
rs12705403	0.94[MKK][hapmap]
rs13243645	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17153738	1.00[LWK][hapmap];0.83[TSI][hapmap]
rs2237648	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2302453	0.94[MKK][hapmap]
rs2395833	1.00[CEU][hapmap];0.95[GIH][hapmap];0.91[MEX][hapmap];0.98[TSI][hapmap];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2395836	0.85[MKK][hapmap]
rs257384	0.85[MKK][hapmap]
rs35585362	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3735613	0.94[MKK][hapmap]
rs3801969	0.91[MKK][hapmap]
rs62483563	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6957586	0.91[EUR][1000 genomes]
rs6975038	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs758943	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7809330	0.94[MKK][hapmap]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106669200-106670400	Flanking Active TSS	K562	blood
2	chr7:106669400-106670400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr7:106669400-106670800	Enhancers	Brain Germinal Matrix	brain
4	chr7:106669400-106670800	Enhancers	Fetal Heart	heart
5	chr7:106669600-106670400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr7:106669600-106670600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr7:106669800-106670400	Enhancers	Fetal Brain Female	brain
8	chr7:106669800-106672400	Weak transcription	Adipose Nuclei	Adipose
9	chr7:106670200-106671400	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr7:106670200-106671400	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr7:106670200-106676800	Weak transcription	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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