Variant report

Variant	rs11776457
Chromosome Location	chr8:113775893-113775894
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:113774348..113777140-chr8:114064225..114066718,2	K562	blood:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs1026488	1.00[YRI][hapmap]
rs1026489	1.00[YRI][hapmap]
rs13254460	1.00[YRI][hapmap]
rs13255029	1.00[YRI][hapmap]
rs13256724	1.00[YRI][hapmap]
rs13257842	1.00[YRI][hapmap]
rs13258944	1.00[YRI][hapmap]
rs13259225	1.00[YRI][hapmap]
rs13264919	1.00[YRI][hapmap]
rs13272429	1.00[YRI][hapmap]
rs13275178	1.00[YRI][hapmap]
rs1350567	1.00[YRI][hapmap]
rs1458994	1.00[YRI][hapmap]
rs170760	1.00[YRI][hapmap]
rs1947633	1.00[YRI][hapmap]
rs1979305	1.00[YRI][hapmap]
rs1993607	1.00[YRI][hapmap]
rs2125552	1.00[YRI][hapmap]
rs2125553	1.00[YRI][hapmap]
rs2194601	1.00[YRI][hapmap]
rs2219486	1.00[YRI][hapmap]
rs231301	1.00[YRI][hapmap]
rs231305	1.00[YRI][hapmap]
rs231306	1.00[YRI][hapmap]
rs231312	1.00[YRI][hapmap]
rs231313	1.00[YRI][hapmap]
rs231323	1.00[YRI][hapmap]
rs2511527	1.00[YRI][hapmap]
rs2511529	1.00[YRI][hapmap]
rs2511530	1.00[YRI][hapmap]
rs4876501	1.00[ASW][hapmap];1.00[YRI][hapmap]
rs56020668	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7818598	1.00[ASW][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533857	chr8:112819659-113801258	Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	9 gene(s)	inside rSNPs	diseases
2	nsv1022457	chr8:113071774-113811177	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
3	esv2753595	chr8:113283214-114190390	Enhancers Weak transcription Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
4	nsv534270	chr8:113585830-113979075	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases
5	esv2754315	chr8:113736824-114048824	ZNF genes & repeats Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv524089	chr8:113761143-113852777	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:113773200-113783400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr8:113773400-113783400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr8:113773600-113783400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr8:113774200-113783400	Weak transcription	HUES64 Cell Line	embryonic stem cell

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