Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11579959	1.00[EUR][1000 genomes]
rs11800215	1.00[AMR][1000 genomes]
rs11802771	1.00[EUR][1000 genomes]
rs11804643	1.00[AMR][1000 genomes]
rs11810019	1.00[AMR][1000 genomes]
rs11811082	1.00[AMR][1000 genomes]
rs11811576	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12563455	1.00[EUR][1000 genomes]
rs4271254	1.00[EUR][1000 genomes]
rs4378251	1.00[EUR][1000 genomes]
rs4384274	1.00[EUR][1000 genomes]
rs4394699	1.00[EUR][1000 genomes]
rs4474303	1.00[EUR][1000 genomes]
rs4559553	1.00[EUR][1000 genomes]
rs4576690	1.00[EUR][1000 genomes]
rs4593870	1.00[EUR][1000 genomes]
rs4625325	1.00[EUR][1000 genomes]
rs4633318	1.00[EUR][1000 genomes]
rs4927278	1.00[EUR][1000 genomes]
rs4927283	1.00[EUR][1000 genomes]
rs4927284	1.00[EUR][1000 genomes]
rs58459838	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60853722	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6588589	1.00[EUR][1000 genomes]
rs6687146	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1818340	chr1:56359741-56408597	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56365200-56382200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr1:56378000-56379600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:56378000-56383200	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr1:56378200-56379400	ZNF genes & repeats	Spleen	Spleen

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